RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C3orf14Q9HBI5 128 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 GIMAP4Q9NUV9 329 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 APOL3O95236 402 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 THY1P04216 161 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ALPPP05187 535 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ENDOUP21128 410 aaKnown RBP14.47□□□□□ -0.09
UPF3B-202ENST00000345865 RPS19P39019 145 aaKnown RBP14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ACTR1BP42025 376 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 TAS2R41P59536 307 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 KIAA1024LP59773 190 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ACTR1AP61163 376 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 PRKCDQ05655 676 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 RUNX2Q13950 521 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 NDUFA9Q16795 377 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 SLC25A30Q5SVS4 291 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 TUBA3EQ6PEY2 450 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ASPGQ86U10 573 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 PROKR2Q8NFJ6 384 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ZCCHC10Q8TBK6 192 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 DOK4Q8TEW6 326 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 COL26A1Q96A83 441 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 SIPA1Q96FS4 1042 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 OR2A14Q96R47 310 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 OR2A5Q96R48 311 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 KCNS3Q9BQ31 491 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 ACTRT3Q9BYD9 372 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 POLR2J2Q9GZM3 115 aaKnown RBP14.47□□□□□ -0.09
UPF3B-202ENST00000345865 SRMSQ9H3Y6 488 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 LYARQ9NX58 379 aaKnown RBP14.47□□□□□ -0.09
UPF3B-202ENST00000345865 GIN1Q9NXP7 522 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 CLEC1BQ9P126 229 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 MKLN1Q9UL63 735 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 CARD8Q9Y2G2 431 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 GPR52Q9Y2T5 361 aa14.47□□□□□ -0.09
UPF3B-202ENST00000345865 SYT5O00445 386 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 ASNA1O43681 348 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 ETV5P41161 510 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 AVPR1BP47901 424 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 ETV1P50549 477 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 RPS15AP62244 130 aaKnown RBP14.46□□□□□ -0.09
UPF3B-202ENST00000345865 NFATC4Q14934 902 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 TIMM50Q3ZCQ8 353 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 DEFB134Q4QY38 66 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 AGAP7PQ5VUJ5 663 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 MTSS1LQ765P7 747 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 C11orf74Q86VG3 221 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 NKAIN4Q8IVV8 208 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 LINC00471Q8N535 108 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 TM4SF19Q96DZ7 209 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 MND1Q9BWT6 205 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 S1PR5Q9H228 398 aa14.46□□□□□ -0.09
UPF3B-202ENST00000345865 EXOSC4Q9NPD3 245 aaKnown RBP14.46□□□□□ -0.09
UPF3B-202ENST00000345865 CENPVL1A0A0U1RR11 272 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 A6NCN8 305 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 FAM170BA6NMN3 283 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 ALOX5P09917 674 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SMIM10L1P0DMW3 83 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 CTHP32929 405 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 S100A5P33763 92 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SIM1P81133 766 aaPredicted RBP14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SNAPC1Q16533 368 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 LIPKQ5VXJ0 399 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 RNLSQ5VYX0 342 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SDE2Q6IQ49 451 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 FRRS1Q6ZNA5 592 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 C16orf62Q7Z3J2 963 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 TMEFF1Q8IYR6 380 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 NT5CQ8TCD5 201 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 CDS1Q92903 461 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SMIM10Q96HG1 83 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 FAM46AQ96IP4 442 aaKnown RBP14.46□□□□□ -0.1
UPF3B-202ENST00000345865 MRGPRX1Q96LB2 322 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SDHCQ99643 169 aaPredicted RBP14.46□□□□□ -0.1
UPF3B-202ENST00000345865 ASPNQ9BXN1 380 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 SAP130Q9H0E3 1048 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 PCOLCE2Q9UKZ9 415 aa14.46□□□□□ -0.1
UPF3B-202ENST00000345865 DIMT1Q9UNQ2 313 aaKnown RBP14.46□□□□□ -0.1
UPF3B-202ENST00000345865 LOC105369274A0A096LPK9 316 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 LOC102723532A0A0G2JNH3 316 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 LRRTM2O43300 516 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 HOXC4P09017 264 aaPredicted RBP14.45□□□□□ -0.1
UPF3B-202ENST00000345865 OMPP47874 163 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 TGM4P49221 684 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 TNFRSF17Q02223 184 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF45Q02386 682 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 PRRT3Q5FWE3 981 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 FCRL6Q6DN72 434 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 HEPHL1Q6MZM0 1159 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 MFSD12Q6NUT3 480 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 CCDC190Q86UF4 302 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 SFTPA2Q8IWL1 248 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 PHC2Q8IXK0 858 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 OR4N4Q8N0Y3 316 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 NDUFB11Q9NX14 153 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 MYO15AQ9UKN7 3530 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 LIPT1Q9Y234 373 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 CFL2Q9Y281 166 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 PEX16Q9Y5Y5 336 aa14.45□□□□□ -0.1
UPF3B-202ENST00000345865 PTNP21246 168 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 CPN2P22792 545 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms