RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ANHXE9PGG2 379 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 HMGN4O00479 90 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLC28A2O43868 658 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 MMP20O60882 483 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 B4GALT2O60909 372 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 IFNA16P05015 189 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CD8BP10966 210 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 DRD2P14416 443 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 AKR1A1P14550 325 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 HMGA1P17096 107 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CELP19835 753 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 HOXD10P28358 340 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 ACSL1P33121 698 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 MAP2K6P52564 334 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 RPS26P62854 115 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 PIN1Q13526 163 aaPredicted RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CKAP5Q14008 2032 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLBPQ14493 270 aaKnown RBP eCLIP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CCDC85BQ15834 202 aaPredicted RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TNFAIP8L2Q6P589 184 aaPredicted RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SMARCD3Q6STE5 483 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TFAP2EQ6VUC0 442 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SHFQ7M4L6 423 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 GPR135Q8IZ08 494 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SRFBP1Q8NEF9 429 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 OR6C4Q8NGE1 309 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TEX47Q8TBZ9 253 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 LINC01599Q8WXQ3 324 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLC9A6Q92581 669 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF607Q96SK3 696 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SECISBP2Q96T21 854 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLAMF7Q9NQ25 335 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 UCKL1Q9NWZ5 548 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 MARCH5Q9NX47 278 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 EEF1E1O43324 174 aaKnown RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 GREM1O60565 184 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 FRKP42685 505 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 MAPK9P45984 424 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 CDH11P55287 796 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ZP1P60852 638 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF273Q14593 569 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ST3GAL2Q16842 350 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 NHLRC3Q5JS37 347 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 IDNKQ5T6J7 187 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF322Q6U7Q0 402 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 FAM83HQ6ZRV2 1179 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 BTN2A1Q7KYR7 527 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 KIAA0907Q7Z7F0 614 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 LHFPL3Q86UP9 236 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ZBTB44Q8NCP5 570 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 FBXO15Q8NCQ5 510 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 OR2AP1Q8NGE2 309 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 HAVCR2Q8TDQ0 301 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SPRYD4Q8WW59 207 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 RFKQ969G6 155 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 YIPF5Q969M3 257 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 LCORQ96JN0 433 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SLC38A2Q96QD8 506 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ABHD1Q96SE0 405 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 FNDC11Q9BVV2 318 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 EGLN3Q9H6Z9 239 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 NEUROD4Q9HD90 331 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SIRT3Q9NTG7 399 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 TRPM5Q9NZQ8 1165 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 POMT2Q9UKY4 750 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 RABL2BQ9UNT1 228 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ENTPD4Q9Y227 616 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 A0A0G2JK05 382 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM202A6NGA9 273 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 H7C4K7 107 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 J3QRE1 110 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF197O14709 1029 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 TSPAN4O14817 238 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 RNF13O43567 381 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 KLK1P06870 262 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SSTR2P30874 369 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 CCT3P49368 545 aaKnown RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 CCL23P55773 120 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 RASSF6Q6ZTQ3 369 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SLC24A5Q71RS6 500 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 MMP21Q8N119 569 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 PIAS4Q8N2W9 510 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 OR4F15Q8NGB8 312 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 OR52H1Q8NGJ2 320 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ST8SIA4Q92187 359 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 ERMAPQ96PL5 475 aaPredicted RBP9.09□□□□□ -0.95
HOXA1-201ENST00000343060 OR51B5Q9H339 312 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SERHL2Q9H4I8 314 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 MED17Q9NVC6 651 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 RDH8Q9NYR8 311 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 GLS2Q9UI32 602 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 SH2B3Q9UQQ2 575 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 GPR52Q9Y2T5 361 aa9.09□□□□□ -0.95
HOXA1-201ENST00000343060 CXorf51AA0A1B0GTR3 108 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SLC5A10A0PJK1 596 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 M0R233 179 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 M0R3H8 397 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF593O00488 134 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms