RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-201ENST00000333371 B3GAT2Q9NPZ5 323 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SEMA4GQ9NTN9 838 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 EYSQ5T1H1 3165 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 FAM172BPA6NC97 362 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 HMX3A6NHT5 357 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 LGI1O95970 557 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 MTNR1AP48039 350 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 RNF144AP50876 292 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 CSNK1G2P78368 415 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 REEP5Q00765 189 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 BNC1Q01954 994 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 PLK5Q496M5 336 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 SLC35F1Q5T1Q4 408 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 PIP5KL1Q5T9C9 394 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 C18orf63Q68DL7 685 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 THOC7Q6I9Y2 204 aaKnown RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 OR4C11Q6IEV9 310 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 CNIH2Q6PI25 160 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 XKRXQ6PP77 449 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ANKK1Q8NFD2 765 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 SLC35C2Q9NQQ7 365 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 GPR34Q9UPC5 381 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 SLC9A8Q9Y2E8 581 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ATG4BQ9Y4P1 393 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 OR1A2Q9Y585 309 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 EDDM13A0A1B0GTR0 161 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 FAM170BA6NMN3 283 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 CASKO14936 926 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ACP2P11117 423 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 GNSP15586 552 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 PPP2R1BP30154 601 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 TRHRP34981 398 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 GPR4P46093 362 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 AVPR1BP47901 424 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 SMSP52788 366 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 TAS2R41P59536 307 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 FAM46CQ5VWP2 391 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF730Q6ZMV8 503 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF438Q7Z4V0 828 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 FAM181AQ8N9Y4 354 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM163Q8TC26 289 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 OTULINQ96BN8 352 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 ARSGQ96EG1 525 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 CNRIP1Q96F85 164 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 SENP5Q96HI0 755 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 C6orf106Q9H6K1 298 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-201ENST00000333371 RMI1Q9H9A7 625 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 PLEKHM1Q9Y4G2 1056 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 KNL1Q8NG31 2342 aa11.57□□□□□ -0.56
VPS33B-201ENST00000333371 C2orf16Q68DN1 1984 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CD8B2A6NJW9 211 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 PRODHO43272 600 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 HRO43593 1189 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 POU2F2P09086 479 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CD8BP10966 210 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 PSKH1P11801 424 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CELP19835 753 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SMIM11AP58511 58 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CHRNEQ04844 493 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 C3orf38Q5JPI3 329 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SLC27A4Q6P1M0 643 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 QSOX2Q6ZRP7 698 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 GET4Q7L5D6 327 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 NKAIN4Q8IVV8 208 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RDH10Q8IZV5 341 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 VWA5B2Q8N398 1253 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CLDN22Q8N7P3 220 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SUN3Q8TAQ9 357 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 TEX47Q8TBZ9 253 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 DOK4Q8TEW6 326 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ART5Q96L15 291 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RNF121Q9H920 327 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 WASH6PQ9NQA3 447 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CHST2Q9Y4C5 530 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SPEGQ15772 3267 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 A0A0A6YYD5 115 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 A0A1W2PR48 441 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 IGLON5A6NGN9 336 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 FAM183AA6NL82 134 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SMLR1H3BR10 107 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SLC30A4O14863 429 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 UBXN7O94888 489 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RAB25P57735 213 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CLDN2P57739 230 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 HNRNPA1L2Q32P51 320 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF628Q5EBL2 1059 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ENTPD8Q5MY95 495 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ETFBKMTQ8IXQ9 262 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SIMC1Q8NDZ2 872 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms