RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 LRR1Q96L50 414 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
TPM3-206ENST00000330188 OR2A14Q96R47 310 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 EGLN3Q9H6Z9 239 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 ABCB10Q9NRK6 738 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 KCMF1Q9P0J7 381 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
TPM3-206ENST00000330188 A6NCN8 305 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 CPSF4LA6NMK7 179 aaKnown RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 FAM170BA6NMN3 283 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 P2RX6O15547 441 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 NTN1O95631 604 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 APBB3O95704 486 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SMIM10L1P0DMW3 83 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 TRHRP34981 398 aaPredicted RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 SOX6P35712 828 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 TRAM2Q15035 370 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 HEPHL1Q6MZM0 1159 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 LRRC25Q8N386 305 aaPredicted RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 PARP16Q8N5Y8 322 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SMIM10Q96HG1 83 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 OR2A5Q96R48 311 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 IRAK4Q9NWZ3 460 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 NTMQ9P121 344 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 DIMT1Q9UNQ2 313 aaKnown RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ISPDA4D126 451 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 TBX1O43435 398 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 FCMRO60667 390 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 CTSVO60911 334 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 RASGRP1O95267 797 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ACADMP11310 421 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 UGT2B7P16662 529 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 CPN2P22792 545 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 PRKAR1BP31321 381 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ACSL1P33121 698 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ZNF45Q02386 682 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 KIR2DS3Q14952 304 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SUZ12Q15022 739 aaKnown RBP13.64□□□□□ -0.23
TPM3-206ENST00000330188 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 FAM214AQ32MH5 1076 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 CDC73Q6P1J9 531 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 FRRS1Q6ZNA5 592 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SLC16A11Q8NCK7 471 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 OR8D4Q8NGM9 314 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 ZCCHC10Q8TBK6 192 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 MS4A4EQ96PG1 132 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 SERINC2Q96SA4 455 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 PHF11Q9UIL8 331 aa13.64□□□□□ -0.23
TPM3-206ENST00000330188 LRP4O75096 1905 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 TNFSF14O43557 240 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 DNAJB6O75190 326 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 RAB36O95755 333 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CRYBB2P43320 205 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 GAS1P54826 345 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 DLX2Q07687 328 aaPredicted RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 ST3GAL3Q11203 375 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 TSPAN31Q12999 210 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 MLLT11Q13015 90 aaPredicted RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 RUNX2Q13950 521 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 AGAP7PQ5VUJ5 663 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 FCRL6Q6DN72 434 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 MRGPREQ86SM8 312 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 TRIM69Q86WT6 500 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 GJD3Q8N144 294 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 SIMC1Q8NDZ2 872 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 FAM83FQ8NEG4 500 aaPredicted RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 TEX47Q8TBZ9 253 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 TMEM163Q8TC26 289 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CDS1Q92903 461 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 COL26A1Q96A83 441 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 MRGPRX1Q96LB2 322 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CNPPD1Q9BV87 410 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 POLR2J2Q9GZM3 115 aaKnown RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 SAP130Q9H0E3 1048 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 NDUFB11Q9NX14 153 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 SEC14L4Q9UDX3 406 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 NTNG1Q9Y2I2 539 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 UGT2A1Q9Y4X1 527 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 COL4A2P08572 1712 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 MYL12BO14950 172 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 UBXN7O94888 489 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 POLR2CP19387 275 aaPredicted RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 HNRNPA2B1P22626 353 aaKnown RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 SOX18P35713 384 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms