RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SKA3Q8IX90 412 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 OR5W2Q8NH69 310 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 FNDC9Q8TBE3 224 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 DDIT4LQ96D03 193 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 PELOQ9BRX2 385 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ACTR10Q9NZ32 417 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 TMEM181Q9P2C4 612 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 LSM5Q9Y4Y9 91 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 BCAS1O75363 584 aaPredicted RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 PRPS1P60891 318 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SGTBQ96EQ0 304 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 MKRN2Q9H000 416 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 TP53TG5Q9Y2B4 290 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 P2RX6O15547 441 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ADAP00813 363 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SOX3P41225 446 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ERVK-16P61578 105 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 MS4A13Q5J8X5 152 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 NIPAL3Q6P499 406 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 TRAPPC6BQ86SZ2 158 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM217AQ8IXS0 508 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 PLD6Q8N2A8 252 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 DEFB118Q96PH6 123 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 QPCTLQ9NXS2 382 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 KNDC1Q76NI1 1749 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SCGB1D1O95968 90 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ADORA3P0DMS8 318 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF43P17038 809 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 CSNK2A1P68400 391 aaPredicted RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 C22orf39Q6P5X5 142 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 CSNK2A3Q8NEV1 391 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 OR52E2Q8NGJ4 325 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SPRYD4Q8WW59 207 aaPredicted RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 KIF25Q9UIL4 384 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 A0A1W2PRU2 124 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 FASLGP48023 281 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 RPS15AP62244 130 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 TMEM35AQ53FP2 167 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 MEGF11A6BM72 1044 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 RDH16O75452 317 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 ALDOBP05062 364 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 CES4AQ5XG92 561 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 CIDECQ96AQ7 238 aaPredicted RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 FZD8Q9H461 694 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 DDX60Q8IY21 1712 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 A0A1W2PS29 197 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C1orf226A1L170 272 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 SMPD1P17405 629 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 IGDCC3Q8IVU1 814 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OR7G1Q8NGA0 311 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OR51T1Q8NGJ9 327 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 SGCEO43556 437 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 CRTAPO75718 401 aaPredicted RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PREPP48147 710 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 LRP8Q14114 963 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF416Q9BWM5 594 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 GLTPQ9NZD2 209 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 B3GNT3Q9Y2A9 372 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 MYOCOSA0A1B0GUC4 107 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 RAB8AP61006 207 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 MRPS10P82664 201 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OGDHQ02218 1023 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 EIF2B1Q14232 305 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PAPD4Q6PIY7 484 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PAPD5Q8NDF8 572 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF681Q96N22 645 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 THAP7Q9BT49 309 aaPredicted RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 B3GNT2Q9NY97 397 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OR7A17O14581 309 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ANKRD28O15084 1053 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OLIG2Q13516 323 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C2orf76Q3KRA6 126 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C16orf78Q8WTQ4 265 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 BMFQ96LC9 184 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC19A3Q9BZV2 496 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 RGPD5Q99666 1765 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 D6RAR5 112 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 H7BY64 318 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ACTL6BO94805 426 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 HOXA9P31269 272 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 GGT2P36268 569 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ELP4Q96EB1 424 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PRAP1Q96NZ9 151 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 SRA1Q9HD15 236 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PPP4R1LQ9P1A2 415 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 MAP1BP46821 2468 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PIGRP01833 764 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 SERPINA7P05543 415 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 ACVRL1P37023 503 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 NOGQ13253 232 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 TXNRD3NBQ6F5E7 133 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 PAQR8Q8TEZ7 354 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OR1F2PQ96R84 312 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms