RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 SMIM10L2BP0DMW5 78 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 PSMB1P20618 241 aaKnown RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 VAMP1P23763 118 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 EDNRAP25101 427 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 AGTR1P30556 359 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 RAB42Q8N4Z0 105 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 OR52I1Q8NGK6 324 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 GTF3C2Q8WUA4 911 aaPredicted RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 SORCS1Q8WY21 1168 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 PDLIM5Q96HC4 596 aaKnown RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 NTMT1Q9BV86 223 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 BARHL1Q9BZE3 327 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 CD84Q9UIB8 345 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 IGKV6D-21A0A0A0MT36 114 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 OR5K3A6NET4 321 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 MTX2O75431 263 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 CLDN11O75508 207 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 RBBP9O75884 186 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 IFNGP01579 166 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 SKP1P63208 163 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 S100A12P80511 92 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 PUM1Q14671 1186 aaKnown RBP eCLIP15.74■□□□□ 0.11
PACS1-201ENST00000320580 KHDRBS2Q5VWX1 349 aaKnown RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 LAIR1Q6GTX8 287 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 TRAPPC5Q8IUR0 188 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 FBXO15Q8NCQ5 510 aaPredicted RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 ELP4Q96EB1 424 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 YKT6O15498 198 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 RBMS1P29558 406 aaKnown RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 SORDQ00796 357 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 SSX2Q16385 188 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 THOC6Q86W42 341 aaKnown RBP15.74■□□□□ 0.11
PACS1-201ENST00000320580 OR4C6Q8NH72 309 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 RBPJLQ9UBG7 517 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 SCML1Q9UN30 329 aa15.74■□□□□ 0.11
PACS1-201ENST00000320580 PRR35P0CG20 571 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZNF35P13682 527 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 GIPRP48546 466 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 FAM209BQ5JX69 171 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZNF425Q6IV72 752 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZNF783Q6ZMS7 281 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 LINC00469Q8N7U9 141 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 OR1M1Q8NGA1 313 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 PGAP3Q96FM1 320 aaPredicted RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 RAD9AQ99638 391 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 SSX3Q99909 188 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 B3GNT4Q9C0J1 378 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 NXF2Q9GZY0 626 aaKnown RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 FN3KQ9H479 309 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 KLHL9Q9P2J3 617 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 IKZF2Q9UKS7 526 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 H3BSH0 61 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 NAGAP17050 411 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 SHC1P29353 583 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 GKP32189 559 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 ETV5P41161 510 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZNF763Q0D2J5 394 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 CRHR2Q13324 411 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZNF273Q14593 569 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 PLBD1Q6P4A8 553 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 APOOLQ6UXV4 268 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 OR4D10Q8NGI6 311 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 IGSF8Q969P0 613 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ARL11Q969Q4 196 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 MARC2Q969Z3 335 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 PINK1Q9BXM7 581 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 DLEC1Q9Y238 1755 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 A0A0G2JLL6 359 aaPredicted RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 GTF2F2P13984 249 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 SLBPQ14493 270 aaKnown RBP eCLIP15.73■□□□□ 0.11
PACS1-201ENST00000320580 SLC30A6Q6NXT4 461 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 PRRT2Q7Z6L0 340 aaPredicted RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 MSRB3Q8IXL7 192 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 OR52E4Q8NGH9 312 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 CASTOR1Q8WTX7 329 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ACTL8Q9H568 366 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 P2RX2Q9UBL9 471 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 DIMT1Q9UNQ2 313 aaKnown RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 AK6Q9Y3D8 172 aaKnown RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 TBL1XO60907 577 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 IFNA6P05013 189 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 AMD1P17707 334 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 GPX2P18283 190 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 TMUB2Q71RG4 321 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 TRILQ7L0X0 811 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 METTL3Q86U44 580 aaKnown RBP15.73■□□□□ 0.11
PACS1-201ENST00000320580 ZDHHC6Q9H6R6 413 aa15.73■□□□□ 0.11
PACS1-201ENST00000320580 ANKRD31Q8N7Z5 1873 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 C2orf78A6NCI8 922 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 STK25O00506 426 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 CLDN7O95471 211 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 AHCYP23526 432 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 GDNFP39905 211 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 PTH2RP49190 550 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 E2F1Q01094 437 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 PLD1Q13393 1074 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 LRIF1Q5T3J3 769 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 SERPINA13PQ6UXR4 307 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms