RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CPPED1Q9BRF8 314 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PAIP1Q9H074 479 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 C12orf65Q9H3J6 166 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ANKRD19PQ9H560 264 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 Q9N2J8 555 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MLXIPLQ9NP71 852 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SPAG4Q9NPE6 437 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FOXJ2Q9P0K8 574 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ANGPT4Q9Y264 503 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC35A3Q9Y2D2 325 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CLCA3PQ9Y6N3 262 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 UNC13CQ8NB66 2214 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 A8MU76 341 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TMEM233B4DJY2 109 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PPP6CO00743 305 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RFXANKO14593 260 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RRP9O43818 475 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HS6ST1O60243 411 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 EIF4E2O60573 245 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 UNC5CO95185 931 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SNX4O95219 450 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 DDAH2O95865 285 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 UQCRBP14927 111 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 NEK2P51955 445 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 NCBP2P52298 156 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PGGT1BP53609 377 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GYS2P54840 703 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC37A1P57057 533 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MLF1P58340 268 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 BNIP1Q12981 228 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KCNAB1Q14722 419 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF141Q15928 474 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 NTRK2Q16620 822 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SFT2D3Q587I9 215 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TIGD3Q6B0B8 471 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 REP15Q6BDI9 236 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MFSD12Q6NUT3 480 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CCDC81Q6ZN84 652 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ATG14Q6ZNE5 492 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RTL4Q6ZR62 310 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TIPARPQ7Z3E1 657 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 DHDDSQ86SQ9 333 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KRT73Q86Y46 540 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 C2orf73Q8N5S3 287 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CLEC1AQ8NC01 280 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FAM98AQ8NCA5 519 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HIPK4Q8NE63 616 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 OR4A15Q8NGL6 344 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC2A12Q8TD20 617 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ARSGQ96EG1 525 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MOCOSQ96EN8 888 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TMEM41AQ96HV5 264 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 VSTM2LQ96N03 204 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PTCHD1Q96NR3 888 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ANKRD27Q96NW4 1050 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CGREF1Q99674 301 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 WDR77Q9BQA1 342 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TACO1Q9BSH4 297 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SCNM1Q9BWG6 230 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 LRMDAQ9H2I8 198 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GLIPR2Q9H4G4 154 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 YY1AP1Q9H869 796 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GORASP2Q9H8Y8 452 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SERHLQ9NQF3 203 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SIRT3Q9NTG7 399 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TEX10Q9NXF1 929 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KLHL3Q9UH77 587 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 EXO1Q9UQ84 846 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GPR55Q9Y2T6 319 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PTRH2Q9Y3E5 179 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HEMK1Q9Y5R4 338 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HS3ST3B1Q9Y662 390 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 AK5Q9Y6K8 562 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 LOC101059948A0A1B0GTJ6 334 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 A8MVJ9 347 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MRASO14807 208 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 DNPH1O43598 174 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FGF17O60258 216 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 B3GALT4O96024 378 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 LIFP15018 202 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF17P17021 662 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 S1PR1P21453 382 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SERPINB3P29508 390 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PRKAR1BP31321 381 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HTR3AP46098 478 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 MAN2A2P49641 1150 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CLK1P49759 484 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RAB8AP61006 207 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 NSDHLQ15738 373 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 DECR1Q16698 335 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 DEFB110Q30KQ9 67 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FAM174BQ3ZCQ3 159 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ANKDD1AQ495B1 522 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 LIN52Q52LA3 116 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 AGKQ53H12 422 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TCHHL1Q5QJ38 904 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HLA-DQA1Q5Y7H0 255 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PAPD4Q6PIY7 484 aaKnown RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 HSDL2Q6YN16 418 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms