RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 POLDIP3Q9BY77 421 aaKnown RBP19.32■□□□□ 0.68
TTC39C-202ENST00000317571 PCOLCE2Q9UKZ9 415 aa19.32■□□□□ 0.68
TTC39C-202ENST00000317571 MRPS2Q9Y399 296 aaKnown RBP19.32■□□□□ 0.68
TTC39C-202ENST00000317571 COL4A2P08572 1712 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 LRP4O75096 1905 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 CPSF4LA6NMK7 179 aaKnown RBP19.31■□□□□ 0.68
TTC39C-202ENST00000317571 SCG5P05408 212 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 HOXC4P09017 264 aaPredicted RBP19.31■□□□□ 0.68
TTC39C-202ENST00000317571 RUNX2Q13950 521 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 MEDAGQ5VYS4 303 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 FCRL6Q6DN72 434 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 TMEM92Q6UXU6 159 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 FAM26EQ8N5C1 309 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 NT5CQ8TCD5 201 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 PATE1Q8WXA2 126 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 TM4SF19Q96DZ7 209 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 GIMAP4Q9NUV9 329 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 LYARQ9NX58 379 aaKnown RBP19.31■□□□□ 0.68
TTC39C-202ENST00000317571 CENPVL1A0A0U1RR11 272 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 SMIM10L1P0DMW3 83 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 RPS15AP62244 130 aaKnown RBP19.31■□□□□ 0.68
TTC39C-202ENST00000317571 SIM1P81133 766 aaPredicted RBP19.31■□□□□ 0.68
TTC39C-202ENST00000317571 TNFRSF17Q02223 184 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 MAP4K2Q12851 820 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 DEFB134Q4QY38 66 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 PRAMEF8Q5VWM4 474 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 PRAMEF7Q5VXH5 474 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 TMEFF1Q8IYR6 380 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 AMER2Q8N7J2 671 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 SMIM10Q96HG1 83 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 CNIH4Q9P003 139 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 ZNF780BQ9Y6R6 833 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 A3GALT2U3KPV4 340 aa19.31■□□□□ 0.68
TTC39C-202ENST00000317571 LOC105369274A0A096LPK9 316 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 LOC102723532A0A0G2JNH3 316 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ALPPP05187 535 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 UGT2B7P16662 529 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 MLLT1Q03111 559 aaPredicted RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 COX10Q12887 443 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 NCF4Q15080 339 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 FRRS1Q6ZNA5 592 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 MTSS1LQ765P7 747 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 OR4N4Q8N0Y3 316 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 NANOGP1Q8N7R0 232 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 FAM83FQ8NEG4 500 aaPredicted RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ASB12Q8WXK4 309 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 HPS1Q92902 700 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 COL26A1Q96A83 441 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 LRR1Q96L50 414 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ZNF582Q96NG8 517 aaPredicted RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 TRNT1Q96Q11 434 aaKnown RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 EVA1BQ9NVM1 165 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 MKLN1Q9UL63 735 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 RPL36Q9Y3U8 105 aaKnown RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 SYT5O00445 386 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ASNA1O43681 348 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 CYP7B1O75881 506 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 RASGRP1O95267 797 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 NDUFV2P19404 249 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 AVPR1BP47901 424 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ANXA11P50995 505 aaKnown RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 HTR4Q13639 388 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 GNA13Q14344 377 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 SPHARQ15513 63 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 MFSD12Q6NUT3 480 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 LYSMD2Q8IV50 215 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 OR52I1Q8NGK6 324 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 CDS1Q92903 461 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ACTRT3Q9BYD9 372 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 C3orf14Q9HBI5 128 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ABCB10Q9NRK6 738 aa19.3■□□□□ 0.68
TTC39C-202ENST00000317571 TESQ9UGI8 421 aaKnown RBP19.3■□□□□ 0.68
TTC39C-202ENST00000317571 ZNF860A6NHJ4 632 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 UPK1BO75841 260 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 APOL3O95236 402 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 POLR2CP19387 275 aaPredicted RBP19.29■□□□□ 0.68
TTC39C-202ENST00000317571 LSSP48449 732 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 TAS2R41P59536 307 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 TGM3Q08188 693 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 SLC13A2Q13183 592 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 ADAM15Q13444 863 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 ALG11Q2TAA5 492 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 HEPHL1Q6MZM0 1159 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 KIAA1324Q6UXG2 1013 aaKnown RBP19.29■□□□□ 0.68
TTC39C-202ENST00000317571 PRSS41Q7RTY9 318 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 C11orf74Q86VG3 221 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 NKAIN4Q8IVV8 208 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 CARD8Q9Y2G2 431 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 GPR52Q9Y2T5 361 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 TBX1O43435 398 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 KDM1AO60341 852 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 ID2Q02363 134 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 GPR18Q14330 331 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 PARP16Q8N5Y8 322 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 FRMD1Q8N878 549 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 FAM46AQ96IP4 442 aaKnown RBP19.29■□□□□ 0.68
TTC39C-202ENST00000317571 TMEM165Q9HC07 324 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 ANKMY1Q9P2S6 941 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 PILRAQ9UKJ1 303 aa19.29■□□□□ 0.68
TTC39C-202ENST00000317571 CAB39Q9Y376 341 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms