RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 WASF3Q9UPY6 502 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SCN9AQ15858 1988 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 STATHP02808 62 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CD63P08962 238 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 AGTR2P50052 363 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SLC25A11Q02978 314 aaKnown RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 ABRAXAS2Q15018 415 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 C14orf28Q4W4Y0 310 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 GPR139Q6DWJ6 353 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 C3P1Q6ZMU1 363 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TERB2Q8NHR7 220 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TSPEARQ8WU66 669 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 KIAA1191Q96A73 305 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 UQCC2Q9BRT2 126 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ANKRD60Q9BZ19 345 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TMEM9BQ9NQ34 198 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PNO1Q9NRX1 252 aaKnown RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ENPP5Q9UJA9 477 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 A0A096LPI6 279 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 MEIOCA2RUB1 952 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 HSBP1L1C9JCN9 74 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 C5orf67F2Z3F1 127 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ERI3O43414 337 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 MMP20O60882 483 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 AMY2BP19961 511 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CD79BP40259 229 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 BDKRB1P46663 353 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR52E8Q6IFG1 317 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 TMEM25Q86YD3 366 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 KRTCAP2Q8N6L1 136 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 DCUN1D4Q92564 292 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 RAB8BQ92930 207 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 FKBP10Q96AY3 582 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 GIMAP5Q96F15 307 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 TMEM68Q96MH6 324 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR14A2Q96R54 314 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 FZD3Q9NPG1 666 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SARDHQ9UL12 918 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 PCYT1BQ9Y5K3 369 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 NUBP2Q9Y5Y2 271 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 TAF1P21675 1872 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 A8MU76 341 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 J3KR12 359 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 NDUFS4O43181 175 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 LRRTM2O43300 516 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 GMDSO60547 372 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 EEDO75530 441 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 UCHL1P09936 223 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 C8orf89P0DMQ9 161 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ART1P52961 327 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR4D2P58180 307 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 GAS6Q14393 721 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 NR0B2Q15466 257 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SYPL2Q5VXT5 272 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR56A1Q8NGH5 318 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR56A3Q8NH54 315 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SLC22A8Q8TCC7 542 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 FRZBQ92765 325 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ASB16Q96NS5 453 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 C19orf12Q9NSK7 152 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 C19orf25Q9UFG5 118 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 TRBV2A0A0J9YWF9 115 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ZNF701M0R085 212 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 SORBS2O94875 1100 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 SNAPINO95295 136 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CAPNS1P04632 268 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SSTR2P30874 369 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 DLSTP36957 453 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 NAA10P41227 235 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 C6orf136Q5SQH8 315 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 METTL11BQ5VVY1 283 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ABHD13Q7L211 337 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 C2CD4AQ8NCU7 369 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR2T33Q8NG76 320 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 OR4K1Q8NGD4 311 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 MCHR1Q99705 422 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 DPYSL5Q9BPU6 564 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CD244Q9BZW8 370 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 NELFAQ9H3P2 528 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 KLHL9Q9P2J3 617 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CACNG2Q9Y698 323 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ANKRD31Q8N7Z5 1873 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 GXYLT2A0PJZ3 443 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 A6NCN8 305 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 AHSA1O95433 338 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 ERCC1P07992 297 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 MAOAP21397 527 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CD38P28907 300 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 AFF3P51826 1226 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 RPS15P62841 145 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 ZNF33AQ06730 810 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SERINC3Q13530 473 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 LASP1Q14847 261 aaKnown RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CILP2Q8IUL8 1156 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 LAS2Q8IYD9 372 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 MINDY1Q8N5J2 469 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 LINC01465Q8N7H1 131 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms