RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ALG2Q9H553 416 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 RNPEPL1Q9HAU8 725 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 ZNF780BQ9Y6R6 833 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 NUP214P35658 2090 aaPredicted RBP19.54■□□□□ 0.72
SMCO4-201ENST00000298966 FKBP6O75344 327 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 SLITRK5O94991 958 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 BMP10O95393 424 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CPSF4O95639 269 aaKnown RBP19.53■□□□□ 0.72
SMCO4-201ENST00000298966 F10P00742 488 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 SERPINA7P05543 415 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 IFI6P09912 130 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 IL1RNP18510 177 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 RUNX2Q13950 521 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CCNIQ14094 377 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 FLOT2Q14254 428 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 AAGABQ6PD74 315 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CA13Q8N1Q1 262 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 RNF148Q8N7C7 305 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 PSMA8Q8TAA3 256 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 POP5Q969H6 163 aaKnown RBP19.53■□□□□ 0.72
SMCO4-201ENST00000298966 MOAP1Q96BY2 351 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 POM121Q96HA1 1249 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 BBS4Q96RK4 519 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 ECSITQ9BQ95 431 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CPPED1Q9BRF8 314 aaPredicted RBP19.53■□□□□ 0.72
SMCO4-201ENST00000298966 INPP5KQ9BT40 448 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 TRIM15Q9C019 465 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 ZNF304Q9HCX3 659 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 SLC25A37Q9NYZ2 338 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 PACSIN3Q9UKS6 424 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CES1P1Q9UKY3 287 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 CPAMD8Q8IZJ3 1885 aa19.53■□□□□ 0.72
SMCO4-201ENST00000298966 MYO1GB0I1T2 1018 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 C19orf84I3L1E1 186 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 SLC19A2O60779 497 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 PSMG1O95456 288 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 CLDN14O95500 239 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 KRT75O95678 551 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 ABCB1P08183 1280 aaPredicted RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 ZGLP1P0C6A0 271 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 RNH1P13489 461 aaKnown RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 CSNK2A2P19784 350 aaPredicted RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 IL10P22301 178 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 MPIP34949 423 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 MANFP55145 182 aaKnown RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 BIKQ13323 160 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 C3AR1Q16581 482 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 FXNQ16595 210 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 MPEG1Q2M385 716 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 RABL3Q5HYI8 236 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 FAAH2Q6GMR7 532 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 ZNF621Q6ZSS3 439 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 PDSS2Q86YH6 399 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 MSRB3Q8IXL7 192 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 CLECL1Q8IZS7 167 aa19.52■□□□□ 0.72
SMCO4-201ENST00000298966 EXOSC8Q96B26 276 aaKnown RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 THUMPD3Q9BV44 507 aaKnown RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 RPF2Q9H7B2 306 aaKnown RBP19.52■□□□□ 0.72
SMCO4-201ENST00000298966 SYNDIG1LA6NDD5 238 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 CLIC1O00299 241 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 FOXS1O43638 330 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 PRAMEF2O60811 474 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 C6orf47O95873 294 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 WDPCPO95876 746 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 COX6A1P12074 109 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 GPX2P18283 190 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 UQCRC2P22695 453 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 GSK3BP49841 420 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 HBA1P69905 142 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 TXNL4AP83876 142 aaKnown RBP19.51■□□□□ 0.71
SMCO4-201ENST00000298966 MS4A2Q01362 244 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 TLE4Q04727 773 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 LIPEQ05469 1076 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 ERICH5Q6P6B1 374 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 BHLHB9Q6PI77 547 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 DNAJC14Q6Y2X3 702 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-201ENST00000298966 TMEM64Q6YI46 380 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 SERPINA11Q86U17 422 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 OR4K14Q8NGD5 310 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 CIDECQ96AQ7 238 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-201ENST00000298966 MAGED4Q96JG8 741 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 KCTD14Q9BQ13 255 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-201ENST00000298966 RNF32Q9H0A6 362 aa19.51■□□□□ 0.71
SMCO4-201ENST00000298966 FAM220BPB1ANY3 271 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 CDKN2CP42773 168 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 PLIN5Q00G26 463 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 EEF1A2Q05639 463 aaKnown RBP19.5■□□□□ 0.71
SMCO4-201ENST00000298966 FADDQ13158 208 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 C18orf63Q68DL7 685 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 ZNF595Q8IYB9 648 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 DTWD1Q8N5C7 304 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 GOLM1Q8NBJ4 401 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 OR9A4Q8NGU2 314 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 SFXN5Q8TD22 340 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 ZFP90Q8TF47 636 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 KAT8Q9H7Z6 458 aaKnown RBP19.5■□□□□ 0.71
SMCO4-201ENST00000298966 TPT1P8Q9HAU6 139 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 MCCC2Q9HCC0 563 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 TINAGQ9UJW2 476 aa19.5■□□□□ 0.71
SMCO4-201ENST00000298966 SPG11Q96JI7 2443 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms