RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ACTA2P62736 377 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ACTG2P63267 376 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LAPTM4AQ15012 233 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RPE65Q16518 533 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HSD17B12Q53GQ0 312 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LINC00696Q6ZRV3 163 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 C19orf47Q8N9M1 422 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR52R1Q8NGF1 315 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 MFSD8Q8NHS3 518 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC41A3Q96GZ6 507 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PITHD1Q9GZP4 211 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 MED11Q9P086 117 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GSKIPQ9P0R6 139 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 NFS1Q9Y697 457 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 C8BP07358 591 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CD27P26842 260 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HOXD9P28356 352 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RBMXP38159 391 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR1D4P47884 311 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ACADVLP49748 655 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PSPHP78330 225 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GRB7Q14451 532 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 DUSP6Q16828 381 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 VMACQ2NL98 169 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PARM1Q6UWI2 310 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ARSKQ6UWY0 536 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR5L1Q8NGL2 311 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LRRC20Q8TCA0 184 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RAB2BQ8WUD1 216 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 AURKBQ96GD4 344 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 AMDHD1Q96NU7 426 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HCAR1Q9BXC0 346 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF700Q9H0M5 742 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF160Q9HCG1 818 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 EMC9Q9Y3B6 208 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 BAZ2AQ9UIF9 1905 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KLF11O14901 512 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 YY2O15391 372 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 RHCEP18577 417 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 HLA-FP30511 346 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 CSNK1A1P48729 337 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ARHGAP19Q14CB8 494 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 NANOGP8Q6NSW7 305 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 OR1J4Q8NGS1 313 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ZFPM2Q8WW38 1151 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 NANOGQ9H9S0 305 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 REV1Q9UBZ9 1251 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 NXT1Q9UKK6 140 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC6A14Q9UN76 642 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 MRPS2Q9Y399 296 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 TRAPPC13A5PLN9 417 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ATG12O94817 140 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 OXSR1O95747 527 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 AMY2BP19961 511 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 IDUAP35475 653 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 EIF2S3P41091 472 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 MC3RP41968 323 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ZP2Q05996 745 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SHFQ7M4L6 423 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SCML4Q8N228 414 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 OR52N2Q8NGI0 321 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 OR51Q1Q8NH59 317 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 CTRCQ99895 268 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 DPAGT1Q9H3H5 408 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ATP13A2Q9NQ11 1180 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 DMRT3Q9NQL9 472 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 COQ3Q9NZJ6 369 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 C5AR2Q9P296 337 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 MYH1P12882 1939 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 LOC102725191A0A1B0GVB3 256 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC22A31A6NKX4 558 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 EEF1E1-BLOC1S5C9J1V9 151 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 EEF1E1O43324 174 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SRPX2O60687 465 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 UGDHO60701 494 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM225BP0DP42 221 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 CKMT2P17540 419 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 CRABP1P29762 137 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 CLDN8P56748 225 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 FXYD6P3P58550 94 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 MVKQ03426 396 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 FOXC1Q12948 553 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 TCEAL1Q15170 157 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 KHDC1Q4VXA5 237 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF551Q7Z340 670 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF584Q8IVC4 421 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 OR14A16Q8NHC5 309 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 TSPEARQ8WU66 669 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM168Q9H0V1 697 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 PPP1R14DQ9NXH3 145 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 A0A0U1RQS6 177 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 FBP2O00757 339 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 HEXAP06865 529 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC5A2P31639 672 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 PRPS1P60891 318 aa6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 EIF2B1Q14232 305 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-202ENST00000297933 ERV3-1Q14264 604 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms