RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SIGLEC11Q96RL6 698 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 ADAP2Q9NPF8 381 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF226Q9NYT6 803 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 MKLN1Q9UL63 735 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 PLCL2Q9UPR0 1127 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 PCDHGA10Q9Y5H3 936 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 RNF215Q9Y6U7 377 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 SPAG17Q6Q759 2223 aa15.52■□□□□ 0.08
CCDC40-201ENST00000269318 THADAQ6YHU6 1953 aa15.52■□□□□ 0.08
CCDC40-201ENST00000269318 OR10H3O60404 316 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 TPST2O60704 377 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 TRMUO75648 421 aaKnown RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 MLLT3P42568 568 aaPredicted RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 MAPK10P53779 464 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 CRISP1P54107 249 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 CSNK2BP67870 215 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 TEKQ02763 1124 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 EMX1Q04741 257 aaPredicted RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 NDUFA9Q16795 377 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 NKAIN2Q5VXU1 208 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 ZCCHC12Q6PEW1 402 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 PODNL1Q6PEZ8 512 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 DGAT2L6Q6ZPD8 337 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 NLGN4XQ8N0W4 816 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 CDRT4Q8N9R6 151 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 C12orf43Q96C57 262 aaKnown RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 SDF2Q99470 211 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 FNDC11Q9BVV2 318 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 DGCR6LQ9BY27 220 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 UCK2Q9BZX2 261 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF350Q9GZX5 532 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 NAA50Q9GZZ1 169 aaKnown RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 MTHFD2LQ9H903 347 aaPredicted RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 LIN28AQ9H9Z2 209 aaKnown RBP15.52■□□□□ 0.07
CCDC40-201ENST00000269318 DUSP22Q9NRW4 184 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 HCN3Q9P1Z3 774 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 WDR45Q9Y484 360 aa15.52■□□□□ 0.07
CCDC40-201ENST00000269318 RHPN2P1A8MT19 583 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 MRPS14O60783 128 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 FAM20BO75063 409 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 NSA2O95478 260 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 OSMP13725 252 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 IDH2P48735 452 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 FNTBP49356 437 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 INAVAQ3KP66 663 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 WDR45BQ5MNZ6 344 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ERI1Q8IV48 349 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 DEPDC4Q8N2C3 294 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 CLIP4Q8N3C7 705 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 MORN4Q8NDC4 146 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF540Q8NDQ6 660 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 FAR1Q8WVX9 515 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 HOXB13Q92826 284 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 STACQ99469 402 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 CCDC90BQ9GZT6 254 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 PLCXD1Q9NUJ7 323 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 LRIT1Q9P2V4 623 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 SATB2Q9UPW6 733 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 SCN2AQ99250 2005 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 TP53BP1Q12888 1972 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 HYKKA2RU49 373 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 TRIM64BA6NI03 449 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 H3BMQ9 156 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 TGFBR3LH3BV60 316 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 FRS3O43559 492 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 HRO43593 1189 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ZBTB11O95625 1053 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 CBX7O95931 251 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ALOX5P09917 674 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 RNH1P13489 461 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 SKP1P63208 163 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ILKQ13418 452 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 EXOSC7Q15024 291 aaKnown RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 GARNL3Q5VVW2 1013 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 NIPAL1Q6NVV3 410 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 SLC25A45Q8N413 288 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 IPCEF1Q8WWN9 437 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ZDHHC12Q96GR4 267 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 COG8Q96MW5 612 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 CD180Q99467 661 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 RBCK1Q9BYM8 510 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ERVMER34-1Q9H9K5 563 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 PDE7BQ9NP56 450 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 CCNB1IP1Q9NPC3 277 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 SLC6A14Q9UN76 642 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF443Q9Y2A4 671 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-201ENST00000269318 IFT52Q9Y366 437 aa15.51■□□□□ 0.07
CCDC40-201ENST00000269318 A0A1B0GVT2 93 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 FITM1A5D6W6 292 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 GIMD1P0DJR0 217 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 RPS4Y1P22090 263 aaKnown RBP15.5■□□□□ 0.07
CCDC40-201ENST00000269318 ALDH4A1P30038 563 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 UGT2B15P54855 530 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 IGLV3-21P80748 117 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-201ENST00000269318 MAP4K2Q12851 820 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 DUSP8Q13202 625 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 SRSF5Q13243 272 aaKnown RBP15.5■□□□□ 0.07
CCDC40-201ENST00000269318 CCNJQ5T5M9 372 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 TMEM236Q5W0B7 351 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms