RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 EMC8O43402 210 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 DNAJB5O75953 348 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 LATS1O95835 1130 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 GIFP27352 417 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 CTBP2P56545 445 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 TPGS2Q68CL5 300 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 CPOQ8IVL8 374 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 SUN3Q8TAQ9 357 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 CNOT9Q92600 299 aaKnown RBP11.46□□□□□ -0.58
SMG6-201ENST00000263073 ECHDC3Q96DC8 303 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 L3HYPDHQ96EM0 354 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 ACTR6Q9GZN1 396 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 RDH14Q9HBH5 336 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.58
SMG6-201ENST00000263073 SPO11Q9Y5K1 396 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 WDPCPO95876 746 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 ERCC1P07992 297 aaPredicted RBP11.46□□□□□ -0.58
SMG6-201ENST00000263073 DLSTP36957 453 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 MC2RQ01718 297 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 ADGRG5Q8IZF4 528 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 GLYATL2Q8WU03 294 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 PTCHD1Q96NR3 888 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 CNTNAP3BQ96NU0 1288 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 NECAB3Q96P71 396 aaPredicted RBP11.46□□□□□ -0.58
SMG6-201ENST00000263073 MICU1Q9BPX6 476 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 ST6GALNAC5Q9BVH7 336 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 BIN3Q9NQY0 253 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 THSD1Q9NS62 852 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 STYXL1Q9Y6J8 313 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 MYH7BA7E2Y1 1941 aa11.46□□□□□ -0.58
SMG6-201ENST00000263073 C7orf72A4D263 438 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 WASHC1A8K0Z3 465 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 GPX3P22352 226 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR4C11Q6IEV9 310 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 DCP2Q8IU60 420 aaKnown RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 GLYATL1Q969I3 302 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 DPH7Q9BTV6 452 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR1A2Q9Y585 309 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 INSL5Q9Y5Q6 135 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 BPIP17213 487 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ADH6P28332 368 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 CRHR2Q13324 411 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SMAD2Q15796 467 aaKnown RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 NADSYN1Q6IA69 706 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 C3orf33Q6P1S2 294 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 POTEKPQ9BYX7 375 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ACTL8Q9H568 366 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 POLMQ9NP87 494 aaPredicted RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 MYH3P11055 1940 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 RAD51DO75771 328 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 IFNA5P01569 189 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OSMP13725 252 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SCAPQ12770 1279 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 KCNC3Q14003 757 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SMG6-201ENST00000263073 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 LCN10Q6JVE6 187 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 NLGN4YQ8NFZ3 816 aaPredicted RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 HCAR2Q8TDS4 363 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 WFIKKN2Q8TEU8 576 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 NINJ1Q92982 152 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 TOMM40LQ969M1 308 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 FAM46BQ96A09 425 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 PGAM5Q96HS1 289 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR5B12Q96R08 314 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR1F2PQ96R84 312 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 AGPAT4Q9NRZ5 378 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 COPS3Q9UNS2 423 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 AP1M2Q9Y6Q5 423 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 A0A1W2PP55 124 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 FAM183AA6NL82 134 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ETV5P41161 510 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ALDH3B1P43353 468 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 BLKP51451 505 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 TRAM1Q15629 374 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SSX2Q16385 188 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ZER1Q7Z7L7 766 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 ASPGQ86U10 573 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR52N2Q8NGI0 321 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 OR5AK2Q8NH90 309 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SLCO3A1Q9UIG8 710 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 NOX1Q9Y5S8 564 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 SLC22A31A6NKX4 558 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 RNASE10Q5GAN6 216 aaKnown RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 NXPE4Q6UWF7 544 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 COMMD6Q7Z4G1 85 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 TECPR1Q7Z6L1 1165 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 C12orf40Q86WS4 652 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 GAB3Q8WWW8 586 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 TSACCQ96A04 125 aaPredicted RBP11.45□□□□□ -0.58
SMG6-201ENST00000263073 LDAHQ9H6V9 325 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 GPATCH2Q9NW75 528 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 RIMS3Q9UJD0 308 aa11.45□□□□□ -0.58
SMG6-201ENST00000263073 C10orf71Q711Q0 1435 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms