RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 IQCHQ86VS3 1027 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 PEX5LQ8IYB4 626 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TMEFF1Q8IYR6 380 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 MORN4Q8NDC4 146 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF675Q8TD23 568 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ZG16BQ96DA0 208 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 IL4I1Q96RQ9 567 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 MTHFD2LQ9H903 347 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 POMT2Q9UKY4 750 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 C19orf53Q9UNZ5 99 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 FCMRO60667 390 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 LDB3O75112 727 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CNOT3O75175 753 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CYP7B1O75881 506 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ATP1B1P05026 303 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 INHBBP09529 407 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TYRP1P17643 537 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TNNI3P19429 210 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 VBP1P61758 197 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 PPP1CAP62136 330 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 SHC2P98077 582 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ID2Q02363 134 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TRAM2Q15035 370 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF628Q5EBL2 1059 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 C1orf94Q6P1W5 598 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 FRRS1Q6ZNA5 592 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 SLCO6A1Q86UG4 719 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CA13Q8N1Q1 262 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 FAM160A2Q8N612 972 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 AVL9Q8NBF6 648 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ORAI3Q9BRQ5 295 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 LRRC61Q9BV99 259 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TPSD1Q9BZJ3 242 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 IL21RQ9HBE5 538 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CTPS2Q9NRF8 586 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 C2orf42Q9NWW7 574 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 MKLN1Q9UL63 735 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 CLCA2Q9UQC9 943 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 WDR45Q9Y484 360 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 A0A087WV62 115 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 IGHV1OR15-9A0A0B4J2B8 117 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 CYR61O00622 381 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 AP3D1O14617 1153 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 FGF17O60258 216 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 GPR75O95800 540 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ALOX5P09917 674 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ADORA3P0DMS8 318 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ACP2P11117 423 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 PIPP12273 146 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ST6GAL1P15907 406 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 NT5EP21589 574 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 CDH3P22223 829 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 LIPAP38571 399 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 AVPR1BP47901 424 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 SERPINB10P48595 397 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 BMXP51813 675 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 RGS8P57771 180 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 OCA2Q04671 838 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ST3GAL3Q11203 375 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 IRF3Q14653 427 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 LARS2Q15031 903 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 DUSP5Q16690 384 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 DGUOKQ16854 277 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 SYT16Q17RD7 645 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 TRMT12Q53H54 448 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ENTPD8Q5MY95 495 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 TMEM201Q5SNT2 666 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 FHL5Q5TD97 284 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 PLAG1Q6DJT9 500 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF438Q7Z4V0 828 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 OR5T3Q8NGG3 340 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 OR8J1Q8NGP2 316 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 PIGUQ9H490 435 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ANKRD19PQ9H560 264 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 UBE2ZQ9H832 354 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 STARD5Q9NSY2 213 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 TBC1D23Q9NUY8 699 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF443Q9Y2A4 671 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 GPR55Q9Y2T6 319 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 SLCO1B1Q9Y6L6 691 aa12.09□□□□□ -0.47
SPTLC1-201ENST00000262554 CPSF4LA6NMK7 179 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 EFCAB9A8MZ26 197 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 M0R082 166 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 FRS3O43559 492 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 PLOD3O60568 738 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ENTPD6O75354 484 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms