RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PPP4R4Q6NUP7 873 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 RELL1Q8IUW5 271 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 SLC44A2Q8IWA5 706 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 UBQLNLQ8IYU4 475 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 CCNYL1Q8N7R7 359 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 C9orf106Q8NAJ2 232 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 OR9A2Q8NGT5 310 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 HGDQ93099 445 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 TUBA1CQ9BQE3 449 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 LIME1Q9H400 295 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 SDHAF3Q9NRP4 125 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 PPP4R1LQ9P1A2 415 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 MRTO4Q9UKD2 239 aaKnown RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 CES1P1Q9UKY3 287 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 WIF1Q9Y5W5 379 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 NINQ8N4C6 2090 aa11.15□□□□□ -0.63
TRAF4-202ENST00000262396 AKAP9Q99996 3911 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 OR6C70A6NIJ9 312 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CLCA1A8K7I4 914 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 SCO2O43819 266 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 ANXA4P09525 319 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CPN1P15169 458 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 S1PR1P21453 382 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CHMP24386 653 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 DPP4P27487 766 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 NTSP30990 170 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 SRD5A2P31213 254 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 MAGEA12P43365 314 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 KCNJ5P48544 419 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 STARP49675 285 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 HMGCS1Q01581 520 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 C2orf80Q0P641 193 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 DAZAP2Q15038 168 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CFAP157Q5JU67 520 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 TCHHL1Q5QJ38 904 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 ZNF678Q5SXM1 525 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 UBAP2Q5T6F2 1119 aaKnown RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 FNDC7Q5VTL7 733 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 RAET1LQ5VY80 246 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 GCNT2Q8N0V5 402 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 MMGT1Q8N4V1 131 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 DCAKDQ8WVC6 231 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 WNT2BQ93097 391 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 ISL2Q96A47 359 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 EFHD2Q96C19 240 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 ERP27Q96DN0 273 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 CNRIP1Q96F85 164 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 FAM111AQ96PZ2 611 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 ZNF382Q96SR6 550 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 STMN4Q9H169 189 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 PIGMQ9H3S5 423 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 NEUROD4Q9HD90 331 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 FETUBQ9UGM5 382 aa11.14□□□□□ -0.63
TRAF4-202ENST00000262396 DMGDHQ9UI17 866 aaKnown RBP11.14□□□□□ -0.63
TRAF4-202ENST00000262396 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 FAM221AA4D161 298 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 SH3D21A4FU49 640 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 TO15178 435 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 RCBTB2O95199 551 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 ENO1P06733 434 aaKnown RBP11.13□□□□□ -0.63
TRAF4-202ENST00000262396 IMPDH1P20839 514 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 GRK2P25098 689 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 GSTM5P46439 218 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 EMDP50402 254 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 NCBP2P52298 156 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAF4-202ENST00000262396 PSMD4P55036 377 aaKnown RBP11.13□□□□□ -0.63
TRAF4-202ENST00000262396 PKNOX1P55347 436 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 EEFSECP57772 596 aaKnown RBP11.13□□□□□ -0.63
TRAF4-202ENST00000262396 MGAT2Q10469 447 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 LCP2Q13094 533 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 STX5Q13190 355 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 UNC50Q53HI1 259 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 OR2A2Q6IF42 318 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 TMEM81Q6P7N7 255 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 PAMR1Q6UXH9 720 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 LCA5Q86VQ0 697 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 IFT20Q8IY31 132 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 ZNF675Q8TD23 568 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 C16orf78Q8WTQ4 265 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 OR2B2Q9GZK3 357 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 FOLH1BQ9HBA9 442 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 MID1IP1Q9NPA3 183 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
TRAF4-202ENST00000262396 GALNT8Q9NY28 637 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 TMEM216Q9P0N5 145 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 ZNF639Q9UID6 485 aa11.13□□□□□ -0.63
TRAF4-202ENST00000262396 PACSIN3Q9UKS6 424 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms