RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ECHDC3Q96DC8 303 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 BHLHE41Q9C0J9 482 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 RNF32Q9H0A6 362 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ENKD1Q9H0I2 346 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OR51V1Q9H2C8 321 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 FAM170BA6NMN3 283 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 NPIPB8E9PQR5 432 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TEX28O15482 410 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OR1F1O43749 312 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 SOCS5O75159 536 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ARHGEF15O94989 841 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TBX6O95947 436 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 RB1P06400 928 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 C1GALT1C1LP0DN25 315 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 CDH11P55287 796 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 WDR5P61964 334 aaKnown RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 ABATP80404 500 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 CRYZQ08257 329 aaKnown RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 LY6G5CQ5SRR4 150 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PLEKHS1Q5SXH7 462 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 CCDC28AQ8IWP9 274 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OR4N5Q8IXE1 308 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 FAM109AQ8N4B1 249 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ANKK1Q8NFD2 765 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 SLC5A11Q8WWX8 675 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PMEPA1Q969W9 287 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 ZNF224Q9NZL3 707 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 CHST2Q9Y4C5 530 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ANKRD61A6NGH8 418 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 GABRPO00591 440 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 SLCO2B1O94956 709 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 EIF4EP06730 217 aaKnown RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 PRKACBP22694 351 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TRIM23P36406 574 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 EPHB3P54753 998 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TAS2R41P59536 307 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OC90Q02509 493 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 MLLT11Q13015 90 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 LTB4RQ15722 352 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 CCNJQ5T5M9 372 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OTPQ5XKR4 325 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 OR4D9Q8NGE8 314 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 UFD1Q92890 307 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 GLYATL1Q969I3 302 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TRIM43Q96BQ3 446 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 IGSF21Q96ID5 467 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 HCAR1Q9BXC0 346 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 SLC28A3Q9HAS3 691 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 MAN2C1Q9NTJ4 1040 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 NLGN3Q9NZ94 848 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PPIEQ9UNP9 301 aaKnown RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 CORO2BQ9UQ03 480 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
SNX1-201ENST00000261889 A0A087WUU8 490 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PCP4L1A6NKN8 68 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PGRMC2O15173 223 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PDPK1O15530 556 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 FCMRO60667 390 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 ADAP00813 363 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 CHRM4P08173 479 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TIMP2P16035 220 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PPIBP23284 216 aaKnown RBP12.21□□□□□ -0.45
SNX1-201ENST00000261889 DCDC1P59894 354 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 GPR176Q14439 515 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 RRM2BQ7LG56 351 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SERPINA12Q8IW75 414 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 ATF6BQ99941 703 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 KLHL31Q9H511 634 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PRELID1Q9Y255 219 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TRAPPC4Q9Y296 219 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SNRNP200O75643 2136 aaKnown RBP12.21□□□□□ -0.45
SNX1-201ENST00000261889 IGLV3-16A0A075B6K0 115 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.45
SNX1-201ENST00000261889 IFNA14P01570 189 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 MT-ND4P03905 459 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PRKAR1AP10644 381 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TYRP14679 529 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 EN2P19622 333 aaPredicted RBP12.21□□□□□ -0.45
SNX1-201ENST00000261889 KELP23276 732 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TRHRP34981 398 aaPredicted RBP12.21□□□□□ -0.45
SNX1-201ENST00000261889 ZNF81P51508 661 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 NCBP2P52298 156 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX1-201ENST00000261889 ILKQ13418 452 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SLC25A35Q3KQZ1 300 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 TCEAL5Q5H9L2 206 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 PLBD1Q6P4A8 553 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 GPR135Q8IZ08 494 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms