RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MMP28Q9H239 520 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SLC38A1Q9H2H9 487 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 MRPS30Q9NP92 439 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 IMP3Q9NV31 184 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 CNIH4Q9P003 139 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 EXOSC1Q9Y3B2 195 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 A0A1W2PS29 197 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 FAM47E-STBD1D6RA91 191 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SYT5O00445 386 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 TFECO14948 347 aaPredicted RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 TPD52L2O43399 206 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 DDOSTP39656 456 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 RPS5P46782 204 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 CHRNEQ04844 493 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 TRAM2Q15035 370 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 FAM78AQ5JUQ0 283 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 PDZK1Q5T2W1 519 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 ZNF730Q6ZMV8 503 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 QSOX2Q6ZRP7 698 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 RASSF6Q6ZTQ3 369 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SHFQ7M4L6 423 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 CACUL1Q86Y37 369 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 MOAP1Q96BY2 351 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 OR7D2Q96RA2 312 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SLC22A4Q9H015 551 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SEMA4GQ9NTN9 838 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 DDX28Q9NUL7 540 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 TOR4AQ9NXH8 423 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 CES1P1Q9UKY3 287 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SNX7Q9UNH6 387 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 ENTPD4Q9Y227 616 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 GSTK1Q9Y2Q3 226 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 GPR55Q9Y2T6 319 aaPredicted RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 SMIM30A4D0T7 59 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 KDM4EB2RXH2 506 aaPredicted RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 POLR1CO15160 346 aaPredicted RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 GUCY1B2O75343 617 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 NTN1O95631 604 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 AIFM1O95831 613 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CSNK2A2P19784 350 aaPredicted RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 FGF9P31371 208 aaPredicted RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 GABRA5P31644 462 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 FABP5Q01469 135 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 DMPKQ09013 629 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 PRR23CQ6ZRP0 262 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 C11orf74Q86VG3 221 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 VRK2Q86Y07 508 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CAMKK1Q8N5S9 505 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 OR2L8Q8NGY9 312 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 OR52P1PQ8NH57 321 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 NR4A3Q92570 626 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 DIO2Q92813 273 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 FAM46AQ96IP4 442 aaKnown RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 ARHGDIGQ99819 225 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 C11orf54Q9H0W9 315 aaPredicted RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 HMX3A6NHT5 357 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CPSF4LA6NMK7 179 aaKnown RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 EMC8O43402 210 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 PKLRP30613 574 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 TRIM23P36406 574 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CD79BP40259 229 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 OMPP47874 163 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 PRR5P85299 388 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 TGM3Q08188 693 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 ST3GAL3Q11203 375 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 ZNF628Q5EBL2 1059 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CLEC12AQ5QGZ9 265 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 TYW3Q6IPR3 259 aaKnown RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 RRM2BQ7LG56 351 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 SPRED2Q7Z698 418 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 LHFPL3Q86UP9 236 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 ZNF485Q8NCK3 441 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 AP3S1Q92572 193 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 TRMT61BQ9BVS5 477 aaKnown RBP14.3□□□□□ -0.12
DDX56-201ENST00000258772 WDR26Q9H7D7 661 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 ANKRA2Q9H9E1 313 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 SLC6A20Q9NP91 592 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 SLC13A4Q9UKG4 626 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 CHST2Q9Y4C5 530 aa14.3□□□□□ -0.12
DDX56-201ENST00000258772 SCN3AQ9NY46 2000 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 GPR89AB7ZAQ6 455 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 MID1O15344 667 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 ALPPP05187 535 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 GPR89BP0CG08 455 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 TRHRP34981 398 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 ZFP69Q49AA0 526 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 PYDC2Q56P42 97 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 SLC35F1Q5T1Q4 408 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 SLC48A1Q6P1K1 146 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CD200R1LQ6Q8B3 271 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 C12orf76Q8N812 135 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 ZFP41Q8N8Y5 198 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 NUP43Q8NFH3 380 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 OR2L5Q8NG80 312 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 SMG7Q92540 1137 aaKnown RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 KLK6Q92876 244 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 KIAA1143Q96AT1 154 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms