RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SOX9P48436 509 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 NCBP2P52298 156 aaKnown RBP eCLIP8.66□□□□□ -1.026e-9■□□□□ 10.1
RPA1-201ENST00000254719 ARHGAP19Q14CB8 494 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 ALG11Q2TAA5 492 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 ZNF750Q32MQ0 723 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 ZNF776Q68DI1 518 aaPredicted RBP8.66□□□□□ -1.02
RPA1-201ENST00000254719 CADM2Q8N3J6 435 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 LRRC17Q8N6Y2 441 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 CAMKVQ8NCB2 501 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 UBASH3BQ8TF42 649 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 TMEM80Q96HE8 168 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 DIRAS2Q96HU8 199 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 RHBGQ9H310 441 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 TMEM5Q9Y2B1 443 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 EXOSC1Q9Y3B2 195 aaKnown RBP8.66□□□□□ -1.02
RPA1-201ENST00000254719 OR10H1Q9Y4A9 318 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 SESN1Q9Y6P5 492 aa8.66□□□□□ -1.02
RPA1-201ENST00000254719 ZFHX3Q15911 3703 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 GPR89AB7ZAQ6 455 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 GPR89BP0CG08 455 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 CPN2P22792 545 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 ZNF234Q14588 700 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 ZNF181Q2M3W8 571 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 KIAA1324Q6UXG2 1013 aaKnown RBP8.65□□□□□ -1.02
RPA1-201ENST00000254719 OAFQ86UD1 273 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 HORMAD2Q8N7B1 307 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 AQP11Q8NBQ7 271 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 OR8J1Q8NGP2 316 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 KCNC2Q96PR1 638 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 TEX10Q9NXF1 929 aaPredicted RBP8.65□□□□□ -1.02
RPA1-201ENST00000254719 MS4A12Q9NXJ0 267 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 TVP23BQ9NYZ1 205 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 CEP290O15078 2479 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 FAM240BA0A1B0GVZ2 78 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 LATO43561 262 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 GPR37L1O60883 481 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 OR6A2O95222 327 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 KLHL12Q53G59 568 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 EXOSC6Q5RKV6 272 aaKnown RBP8.65□□□□□ -1.02
RPA1-201ENST00000254719 SAXO2Q658L1 398 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 KIAA1211LQ6NV74 962 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 ZNF765Q7L2R6 523 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 SFTPA2Q8IWL1 248 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 DNAJC22Q8N4W6 341 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 C2orf73Q8N5S3 287 aaPredicted RBP8.65□□□□□ -1.02
RPA1-201ENST00000254719 OR2L2Q8NH16 312 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 OR14C36Q8NHC7 312 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 RIPOR3Q96MK2 946 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 BTBD1Q9H0C5 482 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 FBRSQ9HAH7 460 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 THSD1Q9NS62 852 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 PLCXD1Q9NUJ7 323 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 IFT52Q9Y366 437 aa8.65□□□□□ -1.02
RPA1-201ENST00000254719 TRBV4-1A0A0J9YWV2 114 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 CENPVL1A0A0U1RR11 272 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 FEZF1A0PJY2 475 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 KCNK2O95069 426 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 RCBTB2O95199 551 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 TGM4P49221 684 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 FXYD6P3P58550 94 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 TRAM2Q15035 370 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 NXNL2Q5VZ03 156 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 KIAA1161Q6NSJ0 714 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 RTL4Q6ZR62 310 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 KLHL36Q8N4N3 616 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 ARHGEF39Q8N4T4 335 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 SLC38A5Q8WUX1 472 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 ARMC5Q96C12 935 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 OR5M11Q96RB7 305 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 DPEP2Q9H4A9 486 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 DIABLOQ9NR28 239 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 C14orf105Q9NVL8 296 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 TAC3Q9UHF0 121 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 A4GNTQ9UNA3 340 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 ENPP4Q9Y6X5 453 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 KALRNO60229 2985 aa8.65□□□□□ -1.03
RPA1-201ENST00000254719 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 DVL2O14641 736 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 HLA-DPB1P04440 258 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 ADRB3P13945 408 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 CD79BP40259 229 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 BIKQ13323 160 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 LRRC32Q14392 662 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 WSCD2Q2TBF2 565 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 KIF18BQ86Y91 864 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
RPA1-201ENST00000254719 HDDC3Q8N4P3 179 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 MORN4Q8NDC4 146 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 C15orf40Q8WUR7 153 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 OSTF1Q92882 214 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 GIMAP5Q96F15 307 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 PDXPQ96GD0 296 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 SLC22A4Q9H015 551 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 SRMSQ9H3Y6 488 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 NEK6Q9HC98 313 aa8.64□□□□□ -1.03
RPA1-201ENST00000254719 GPR55Q9Y2T6 319 aaPredicted RBP8.64□□□□□ -1.03
RPA1-201ENST00000254719 A8MUA0 341 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms