RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SLC12A9Q9BXP2 914 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 POT1Q9NUX5 634 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 KCNN3Q9UGI6 736 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 BRINP1O60477 761 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 PRKXP51817 358 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SPAG16Q8N0X2 631 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 OR7G3Q8NG95 312 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SPRYD4Q8WW59 207 aaPredicted RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 A8MVJ9 347 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 H0YAE9 185 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 GALNT1Q10472 559 aaPredicted RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 STOML3Q8TAV4 291 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 ICKQ9UPZ9 632 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SPEF1Q9Y4P9 236 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 OTOL1A6NHN0 477 aaPredicted RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 TNFSF12O43508 249 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC19A2O60779 497 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 PTGS2P35354 604 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 WDR5P61964 334 aaKnown RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 HSD11B2P80365 405 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 RGNQ15493 299 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 OR8J1Q8NGP2 316 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 OR5B2Q96R09 309 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 LPAR4Q99677 370 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC46A2Q9BY10 475 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 SYNPO2LQ9H987 977 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 C17orf105B2RV13 164 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 CTSCP53634 463 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 ZMYND19Q96E35 227 aaPredicted RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 TOE1Q96GM8 510 aaKnown RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 C8orf33Q9H7E9 229 aaPredicted RBP17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 TMEM184CQ9NVA4 438 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 CSNK1G3Q9Y6M4 447 aa17.72■□□□□ 0.43
SMARCC1-201ENST00000254480 RGS9O75916 674 aaPredicted RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 GRHL2Q6ISB3 625 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ELMOD2Q8IZ81 293 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ACTR10Q9NZ32 417 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 RNF215Q9Y6U7 377 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 RUNDC3AQ59EK9 446 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF559Q9BR84 538 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ACTRT3Q9BYD9 372 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 WDR6Q9NNW5 1121 aaKnown RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 GON4LQ3T8J9 2241 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 EEF1E1-BLOC1S5C9J1V9 151 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF829Q3KNS6 432 aaPredicted RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 FBXO46Q6PJ61 603 aaPredicted RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ACBD7Q8N6N7 88 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF709Q8N972 641 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 NAA11Q9BSU3 229 aaPredicted RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 CCDC86Q9H6F5 360 aaKnown RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC1A7O00341 560 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 GSTM4Q03013 218 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 EXOSC7Q15024 291 aaKnown RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 FAM189A2Q15884 450 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 MRPL10Q7Z7H8 261 aaKnown RBP17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 MFSD6LQ8IWD5 586 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 OR5L2Q8NGL0 311 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 FGF13Q92913 245 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 CRB3Q9BUF7 120 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 HEBP1Q9NRV9 189 aa17.71■□□□□ 0.43
SMARCC1-201ENST00000254480 TRIM64BA6NI03 449 aa17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 MS4A2Q01362 244 aa17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 TP53I3Q53FA7 332 aa17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 PARS2Q7L3T8 475 aaKnown RBP17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 ENDOVQ8N8Q3 282 aaKnown RBP17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 L3HYPDHQ96EM0 354 aa17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 B3GALT1Q9Y5Z6 326 aa17.71■□□□□ 0.42
SMARCC1-201ENST00000254480 MYH3P11055 1940 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 SPATS1Q496A3 300 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 BCL2L15Q5TBC7 163 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 UNC5DQ6UXZ4 953 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEFF1Q8IYR6 380 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 FAM71F1Q96KD3 344 aaPredicted RBP17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 NMNAT1Q9HAN9 279 aaPredicted RBP17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 C2orf42Q9NWW7 574 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 PTBP2Q9UKA9 531 aaKnown RBP17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 SLC9B1P1A6NJY1 282 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 ETV4P43268 484 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 MTNR1AP48039 350 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 MFSD8Q8NHS3 518 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 PCDHB16Q9NRJ7 776 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 CD207Q9UJ71 328 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 ANXA3P12429 323 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 RGRP47804 291 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 CCNJQ5T5M9 372 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 MANEALQ5VSG8 457 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 ARHGAP11AQ6P4F7 1023 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 OR5T1Q8NG75 326 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 KCNN1Q92952 543 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 ZNF334Q9HCZ1 680 aaPredicted RBP17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 SLC22A31A6NKX4 558 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 CDKN3Q16667 212 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 OR52E1Q8NGJ3 308 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEM168Q9H0V1 697 aa17.7■□□□□ 0.42
SMARCC1-201ENST00000254480 MGAT4CQ9UBM8 478 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms