RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CNIH4Q9P003 139 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 DIMT1Q9UNQ2 313 aaKnown RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZSCAN9O15535 394 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 KDM1AO60341 852 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 HOXB2P14652 356 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ETV6P41212 452 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SMSP52788 366 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 PDX1P52945 283 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 GAS1P54826 345 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 MLLT1Q03111 559 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 MAP4K2Q12851 820 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SHHQ15465 462 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SNAPC1Q16533 368 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 FLYWCH1Q4VC44 716 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 FBXO42Q6P3S6 717 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 MTSS1LQ765P7 747 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 CCDC190Q86UF4 302 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 LSRQ86X29 649 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR7G2Q8NG99 324 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 FLVCR1-AS1Q8TAF5 88 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 TSACCQ96A04 125 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ACTRT3Q9BYD9 372 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 CARD8Q9Y2G2 431 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 NTNG1Q9Y2I2 539 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 GPR52Q9Y2T5 361 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 PCDHGB6Q9Y5F9 930 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SPTBN5Q9NRC6 3674 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 FAM170BA6NMN3 283 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 MYL12BO14950 172 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 DNAJB6O75190 326 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 APOL3O95236 402 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 MED26O95402 600 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 RAB36O95755 333 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 ACADMP11310 421 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 GSTM3P21266 225 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 PSMA1P25786 263 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 AVPR1BP47901 424 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 RPS15AP62244 130 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 MLLT11Q13015 90 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 LIPKQ5VXJ0 399 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 C16orf62Q7Z3J2 963 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 ASPGQ86U10 573 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 PHC2Q8IXK0 858 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC16A11Q8NCK7 471 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 SAP130Q9H0E3 1048 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 SRMSQ9H3Y6 488 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 SEC14L4Q9UDX3 406 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 LIPT1Q9Y234 373 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 FANCMQ8IYD8 2048 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 ALOX12P18054 663 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 MAGP20916 626 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 LBX1P52954 281 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 C11orf74Q86VG3 221 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 COL26A1Q96A83 441 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 FAM46AQ96IP4 442 aaKnown RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 SDHCQ99643 169 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 RACGAP1Q9H0H5 632 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 LMAN2LQ9H0V9 348 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 CPNE5Q9HCH3 593 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 TMEM74BQ9NUR3 256 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 KCMF1Q9P0J7 381 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 STUB1Q9UNE7 303 aa18.3■□□□□ 0.52
CDC42EP1-201ENST00000249014 P2RX6O15547 441 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 AQP9O43315 295 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 KLF8O95600 359 aaPredicted RBP18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 EGFP01133 1207 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 SPNP16150 400 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 KIAA1024LP59773 190 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 HYAL1Q12794 435 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 TRAM2Q15035 370 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 SDE2Q6IQ49 451 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 HEPHL1Q6MZM0 1159 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC27A4Q6P1M0 643 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 TMEM184AQ6ZMB5 413 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 USP30Q70CQ3 517 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR4N5Q8IXE1 308 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 RBM12BQ8IXT5 1001 aaKnown RBP18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZCCHC10Q8TBK6 192 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 TEX47Q8TBZ9 253 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 TMEM163Q8TC26 289 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 GNPDA2Q8TDQ7 276 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 ITPKCQ96DU7 683 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 TMEM168Q9H0V1 697 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 SACM1LQ9NTJ5 587 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC13A4Q9UKG4 626 aa18.29■□□□□ 0.52
CDC42EP1-201ENST00000249014 A0A075B6Q4 140 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 CTSVO60911 334 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 THY1P04216 161 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 IMPDH2P12268 514 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 OMPP47874 163 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 TNFRSF17Q02223 184 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 RGS1Q08116 209 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 TSPAN31Q12999 210 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 C1DQ13901 141 aaKnown RBP18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 NFATC4Q14934 902 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 SPANXN2Q5MJ10 180 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ATAT1Q5SQI0 421 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ATAD3BQ5T9A4 648 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 MFSD12Q6NUT3 480 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms