RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MAGP20916 626 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 CPN2P22792 545 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SMSP52788 366 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 TAS2R41P59536 307 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SRP54P61011 504 aaKnown RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 PRKCDQ05655 676 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 ST3GAL3Q11203 375 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 TSPAN31Q12999 210 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 RUNX2Q13950 521 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 DOC2BQ14184 412 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SPHARQ15513 63 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SOWAHCQ53LP3 525 aaPredicted RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 PRRT3Q5FWE3 981 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 FIGLAQ6QHK4 219 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 RASSF6Q6ZTQ3 369 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 VRK2Q86Y07 508 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 TOR1AIP2Q8NFQ8 470 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 OR7G2Q8NG99 324 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SNRNP27Q8WVK2 155 aaKnown RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 RSC1A1Q92681 617 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 KAT2AQ92830 837 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 MND1Q9BWT6 205 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 C8orf33Q9H7E9 229 aaPredicted RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 EQTNQ9NQ60 294 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 KLHL28Q9NXS3 571 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 CLEC2DQ9UHP7 191 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SLC13A4Q9UKG4 626 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 DAPP1Q9UN19 280 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 DIMT1Q9UNQ2 313 aaKnown RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 GPR55Q9Y2T6 319 aaPredicted RBP15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SLC22A7Q9Y694 548 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 CCDC88CQ9P219 2028 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 FAM221BA6H8Z2 402 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ZIC2O95409 532 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ALOX5P09917 674 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 NDUFV2P19404 249 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF10P21506 573 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 IFNA8P32881 189 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ETV6P41212 452 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 TPMTP51580 245 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SNRPNP63162 240 aaKnown RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF45Q02386 682 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ALG11Q2TAA5 492 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SYT14P1Q58G82 188 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 EXOSC6Q5RKV6 272 aaKnown RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 C16orf62Q7Z3J2 963 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 TRIM73Q86UV7 250 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 KIF18BQ86Y91 864 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 CYP4Z2PQ8N1L4 340 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 IQCF1Q8N6M8 205 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 RNF167Q9H6Y7 350 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ANKRA2Q9H9E1 313 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 CD93Q9NPY3 652 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ACTR10Q9NZ32 417 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 CFL2Q9Y281 166 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 PIAS3Q9Y6X2 628 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 P2RX6O15547 441 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 NARSO43776 548 aaKnown RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 B3GALT2O43825 422 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 KIAA0513O60268 411 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 FCMRO60667 390 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 CSO75390 466 aaKnown RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 RASGRP1O95267 797 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 TLX1P31314 330 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 AKT2P31751 481 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 BMP8BP34820 402 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SOX18P35713 384 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 PDX1P52945 283 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 DECR1Q16698 335 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 KLHL22Q53GT1 634 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 MANEAQ5SRI9 462 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 PERM1Q5SV97 790 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 C6orf132Q5T0Z8 1188 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 FRRS1Q6ZNA5 592 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 HMGN2P46Q86SG4 172 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SLC34A3Q8N130 599 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SLC16A11Q8NCK7 471 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 OR52P1PQ8NH57 321 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF582Q96NG8 517 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF576Q9H609 170 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 C6orf106Q9H6K1 298 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-201ENST00000237186 LYRM4Q9HD34 91 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SEMA4GQ9NTN9 838 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 PEX16Q9Y5Y5 336 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 SZT2Q5T011 3432 aa15.14■□□□□ 0.01
UBE3D-201ENST00000237186 TRBV23OR9-2A0A075B6M9 112 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 A0A075B6Q4 140 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 ZSCAN9O15535 394 aaPredicted RBP15.13■□□□□ 0.01
UBE3D-201ENST00000237186 GPX5O75715 221 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 IFI6P09912 130 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 CDH3P22223 829 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 OMPP47874 163 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 GAS1P54826 345 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 MLLT11Q13015 90 aaPredicted RBP15.13■□□□□ 0.01
UBE3D-201ENST00000237186 GPR18Q14330 331 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 DEFB134Q4QY38 66 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms