RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CLEC18CQ8NCF0 446 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 NUP43Q8NFH3 380 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 NODALQ96S42 347 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 DOHHQ9BU89 302 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 DPY30Q9C005 99 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 SIRT3Q9NTG7 399 aaPredicted RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 INTS9Q9NV88 658 aaKnown RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 CNIH4Q9P003 139 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 OR10H1Q9Y4A9 318 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 PCNX1Q96RV3 2341 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 GXYLT2A0PJZ3 443 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 LRRC3CA6NJW4 275 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 C9JVG2 144 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 SLCO1B7G3V0H7 640 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 ZNF195O14628 629 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 ANKRD28O15084 1053 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 AGFG2O95081 481 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 CELA3AP09093 270 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 RFPL3SP0C7P2 107 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 RNF224P0DH78 156 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 NAGAP17050 411 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 CASP3P42574 277 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 MAGEA5P43359 124 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 C21orf58P58505 322 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 GAB1Q13480 694 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 C1QL3Q5VWW1 255 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 OR4F3Q6IEY1 312 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 OGFOD2Q6N063 350 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 FGD2Q7Z6J4 655 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 SLC22A16Q86VW1 577 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 FBXO30Q8TB52 745 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 PIWIL2Q8TC59 973 aaKnown RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 EFHD2Q96C19 240 aaPredicted RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 OTUB1Q96FW1 271 aaPredicted RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 C16orf58Q96GQ5 468 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 MARK4Q96L34 752 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 TEX37Q96LM6 180 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 RILPQ96NA2 401 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 ADOQ96SZ5 270 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 PRPF18Q99633 342 aaKnown RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 YIPF4Q9BSR8 244 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 DUSP26Q9BV47 211 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 BHLHE41Q9C0J9 482 aaPredicted RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 CXorf36Q9H7Y0 433 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 IL1RL2Q9HB29 575 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 ATAD3AQ9NVI7 634 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 AIG1Q9NVV5 245 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 SH3BGRL2Q9UJC5 107 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 ERRFI1Q9UJM3 462 aaPredicted RBP11.63□□□□□ -0.55
LSM5-201ENST00000223084 SNX8Q9Y5X2 465 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 LIPGQ9Y5X9 500 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 USH1CQ9Y6N9 552 aa11.63□□□□□ -0.55
LSM5-201ENST00000223084 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 A0A1B0GTH9 108 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 ACOT7O00154 380 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 CFLARO15519 480 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 EMC8O43402 210 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 TSPAN2O60636 221 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 DIAPH2O60879 1101 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 STSP08842 583 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 IFI6P09912 130 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 GABRA3P34903 492 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 PTGDSP41222 190 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 WNT3P56703 355 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 UFM1P61960 85 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 PHC1P78364 1004 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 MLC1Q15049 377 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 C3AR1Q16581 482 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 TMEM198Q66K66 360 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 NUP54Q7Z3B4 507 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 SPATA19Q7Z5L4 167 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 CAMKMTQ7Z624 323 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 CLECL1Q8IZS7 167 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 GHDCQ8N2G8 530 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 OR5P2Q8WZ92 322 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 PIK3R3Q92569 461 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 FAM120BQ96EK7 910 aaKnown RBP11.62□□□□□ -0.55
LSM5-201ENST00000223084 GIMAP5Q96F15 307 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 C7orf26Q96N11 449 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 COL21A1Q96P44 957 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 OR52B2Q96RD2 323 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 SECISBP2Q96T21 854 aaKnown RBP11.62□□□□□ -0.55
LSM5-201ENST00000223084 LMF2Q9BU23 707 aaKnown RBP11.62□□□□□ -0.55
LSM5-201ENST00000223084 ANGPTL4Q9BY76 406 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 METTL7AQ9H8H3 244 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 ZDHHC11Q9H8X9 412 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 C3orf14Q9HBI5 128 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 ZFP64Q9NPA5 681 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 NTMQ9P121 344 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms