RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 PRAMEF8Q5VWM4 474 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 PRAMEF7Q5VXH5 474 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 GPR139Q6DWJ6 353 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 OR5AR1Q8NGP9 310 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 FBXL8Q96CD0 374 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 CDCA3Q99618 268 aaPredicted RBP10.54□□□□□ -0.72
KNOP1-201ENST00000219837 ZFYVE21Q9BQ24 234 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 CRB3Q9BUF7 120 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 HCFC1R1Q9NWW0 138 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 TMEM14AQ9Y6G1 99 aa10.54□□□□□ -0.72
KNOP1-201ENST00000219837 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 CDK2P24941 298 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SOX3P41225 446 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 MFSD13AQ14CX5 517 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ZNF765Q7L2R6 523 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 FAM86C1Q9NVL1 165 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 MARCH4Q9P2E8 410 aaPredicted RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 M0R233 179 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 LCATP04180 440 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 CD34P28906 385 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ART1P52961 327 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 COL28A1Q2UY09 1125 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 PIGGQ5H8A4 983 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 HES5Q5TA89 166 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 CLECL1Q8IZS7 167 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ZNF681Q96N22 645 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SFXN2Q96NB2 322 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ST6GALNAC5Q9BVH7 336 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 MDFIC2A0A1B0GVS7 189 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 EEF1E1-BLOC1S5C9J1V9 151 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 AKR1C2P52895 323 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 TMBIM6P55061 237 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SLC10A2Q12908 348 aaPredicted RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 NDUFAF5Q5TEU4 345 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 DUS1LQ6P1R4 473 aaKnown RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SOX17Q9H6I2 414 aaPredicted RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 C14orf119Q9NWQ9 140 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 TAS2R3Q9NYW6 316 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 VDAC3Q9Y277 283 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 I3L521 148 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 KLF11O14901 512 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SNAPC5O75971 98 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 CTSAP10619 480 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 RPP30P78346 268 aaKnown RBP10.53□□□□□ -0.72
KNOP1-201ENST00000219837 CLLU1OSQ5K130 101 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 UGT2A3Q6UWM9 527 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 OR6C4Q8NGE1 309 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 KLHL33A6NCF5 533 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SNAP29O95721 258 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 RAB4BP61018 213 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 NIPAL4Q0D2K0 466 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 TMEM205Q6UW68 189 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 RHEBL1Q8TAI7 183 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 FIBINQ8TAL6 211 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 SLC39A1Q9NY26 324 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 C5AR2Q9P296 337 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 MAB21L2Q9Y586 359 aa10.53□□□□□ -0.72
KNOP1-201ENST00000219837 EPOP01588 193 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 ETFAP13804 333 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 NR4A2P43354 598 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 SUOXP51687 545 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 EEF1A1P68104 462 aaKnown RBP10.52□□□□□ -0.72
KNOP1-201ENST00000219837 NTRK2Q16620 822 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 ZNF695Q8IW36 515 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 MAL2Q969L2 176 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 TOE1Q96GM8 510 aaKnown RBP10.52□□□□□ -0.72
KNOP1-201ENST00000219837 MYADMQ96S97 322 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 INPP5KQ9BT40 448 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 MAGIXQ9H6Y5 334 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 MEPEQ9NQ76 525 aaPredicted RBP10.52□□□□□ -0.72
KNOP1-201ENST00000219837 DNAJB11Q9UBS4 358 aa10.52□□□□□ -0.72
KNOP1-201ENST00000219837 FAM230AA0A1W2PPH8 454 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 F5H5K5 113 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
KNOP1-201ENST00000219837 RAD1O60671 282 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 PITPNBP48739 271 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 SGSHP51688 502 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 CSNK2A1P68400 391 aaPredicted RBP10.52□□□□□ -0.73
KNOP1-201ENST00000219837 HTRA3P83110 453 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 IRF4Q15306 451 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 MANEAQ5SRI9 462 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 METTL2BQ6P1Q9 378 aaKnown RBP10.52□□□□□ -0.73
KNOP1-201ENST00000219837 IQCF1Q8N6M8 205 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 CSNK2A3Q8NEV1 391 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 FAM71F1Q96KD3 344 aaPredicted RBP10.52□□□□□ -0.73
KNOP1-201ENST00000219837 SETD1AO15047 1707 aaKnown RBP10.52□□□□□ -0.73
KNOP1-201ENST00000219837 SLC16A8O95907 504 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 HPRP00739 348 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 DDCP20711 480 aa10.52□□□□□ -0.73
KNOP1-201ENST00000219837 GABRR1P24046 479 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms