RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 COX18Q8N8Q8 333 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 C17orf47Q8NEP4 570 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 SLC35A4Q96G79 324 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 LMF1Q96S06 567 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 PIGUQ9H490 435 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 Q9N2J8 555 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 ACACBO00763 2458 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 PTPRQQ9UMZ3 2332 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 GXYLT2A0PJZ3 443 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 HMGN4O00479 90 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 ITGA10O75578 1167 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 SLC7A2P52569 658 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 SOX8P57073 446 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 MLF1P58340 268 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 ACER2Q5QJU3 275 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 XAGE5Q8WWM1 108 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 TP53INP1Q96A56 240 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 TMEM125Q96AQ2 219 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 STACQ99469 402 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 SH3GL1Q99961 368 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 DUSP22Q9NRW4 184 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 GMEB1Q9Y692 573 aa25.19■■□□□ 1.62
CHMP4B-201ENST00000217402 C15orf38-AP3S2A0A0A6YYH1 394 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 ZNF354AO60765 605 aaPredicted RBP25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 NUDT7P0C024 238 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 GPX2P18283 190 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 CPOXP36551 454 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 ANXA11P50995 505 aaKnown RBP25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 FADDQ13158 208 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 BORAQ6PGQ7 559 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 C16orf89Q6UX73 402 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 CCDC121Q6ZUS5 278 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 ARPINQ7Z6K5 226 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 DEFB107AQ8IZN7 70 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 PGAM4Q8N0Y7 254 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 FDCSPQ8NFU4 85 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 SNRNP27Q8WVK2 155 aaKnown RBP25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 RMND5BQ96G75 393 aaPredicted RBP25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 CNTNAP3BQ96NU0 1288 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 CNTNAP3Q9BZ76 1288 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 PIF1Q9H611 641 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 CMTM6Q9NX76 183 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 NDE1Q9NXR1 346 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 TEKT2Q9UIF3 430 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 L3MBTL1Q9Y468 752 aa25.18■■□□□ 1.62
CHMP4B-201ENST00000217402 TTC36A6NLP5 189 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 DUXAA6NLW8 204 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 RFX3P48380 749 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 DSTNP60981 165 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 GALNT10Q86SR1 603 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 TAGAPQ8N103 731 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 OR10A6Q8NH74 314 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 ZNF354BQ96LW1 612 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 RASL10BQ96S79 203 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 KAT8Q9H7Z6 458 aaKnown RBP25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 SPAG4Q9NPE6 437 aa25.17■■□□□ 1.62
CHMP4B-201ENST00000217402 DOCK10Q96BY6 2186 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 ACOX3O15254 700 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 ASNA1O43681 348 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 NADKO95544 446 aaPredicted RBP25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 NRG3P56975 720 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 PLCXD2Q0VAA5 305 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 TBR1Q16650 682 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 MEP1AQ16819 746 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 PIGGQ5H8A4 983 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 CRB2Q5IJ48 1285 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 ABHD17BQ5VST6 288 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 AGAP7PQ5VUJ5 663 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 LINC00696Q6ZRV3 163 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 SLC15A3Q8IY34 581 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 ARMC10Q8N2F6 343 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 SLC22A8Q8TCC7 542 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 EXTL1Q92935 676 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 HSPBAP1Q96EW2 488 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 AGAP4Q96P64 663 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 ECSITQ9BQ95 431 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 CBLCQ9ULV8 474 aa25.16■■□□□ 1.62
CHMP4B-201ENST00000217402 A8MVJ9 347 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TRHRP34981 398 aaPredicted RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 SOX11P35716 441 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 POU6F2P78424 691 aaPredicted RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 CYP51A1Q16850 503 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 CCNJQ5T5M9 372 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 BEST3Q8N1M1 668 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 MAL2Q969L2 176 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TMBIM1Q969X1 311 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 BTBD2Q9BX70 525 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 GIN1Q9NXP7 522 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TAS2R1Q9NYW7 299 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 ADA2Q9NZK5 511 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 YARS2Q9Y2Z4 477 aaKnown RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TPRP12270 2363 aaKnown RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 NME4O00746 187 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TO15178 435 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TNFRSF21O75509 655 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 ABCD3P28288 659 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 SSR4P51571 173 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 MRPS22P82650 360 aaKnown RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 TXNL4AP83876 142 aaKnown RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 GCNT6Q5T4J0 391 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms