RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ETV6P41212 452 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 CDH11P55287 796 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 TEKQ02763 1124 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 CHRNEQ04844 493 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 DUSP2Q05923 314 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF57Q68EA5 555 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SLC27A4Q6P1M0 643 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 PLET1Q6UQ28 207 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 HSDL2Q6YN16 418 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 KIF18BQ86Y91 864 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 GHDCQ8N2G8 530 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ASCC1Q8N9N2 400 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 UFD1Q92890 307 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ST6GAL2Q96JF0 529 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF514Q96K75 400 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 NLKQ9UBE8 527 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 NDRG2Q9UN36 371 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 DVL2O14641 736 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 CPNE3O75131 537 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 LALBAP00709 142 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SLC2A2P11168 524 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 MC3RP41968 323 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF234Q14588 700 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 LTB4RQ15722 352 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 RNASE12Q5GAN4 147 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 BBS1Q8NFJ9 593 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ZFPM2Q8WW38 1151 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SUSD6Q92537 303 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 PLEKHB1Q9UF11 243 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 GSTK1Q9Y2Q3 226 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 TRPM6Q9BX84 2022 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 DOCK9Q9BZ29 2069 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 ZC3H12DA2A288 527 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SMLR1H3BR10 107 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 CERS1P27544 350 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 MAT2AP31153 395 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 CAMK1Q14012 370 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 E2F2Q14209 437 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 UBE3DQ7Z6J8 389 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 MARCH9Q86YJ5 346 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 OR4N5Q8IXE1 308 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 Q8N402 240 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 FBXO15Q8NCQ5 510 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-221ENST00000640341 OR8D4Q8NGM9 314 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 OR5K2Q8NHB8 316 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 RASSF5Q8WWW0 418 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 MAN2C1Q9NTJ4 1040 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 SCN2AQ99250 2005 aa13.74□□□□□ -0.21
SCARB2-221ENST00000640341 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 CCNYL3P0C7X3 344 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF24P17028 368 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SOX9P48436 509 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SLC9A3P48764 834 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 PCDH1Q08174 1060 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 QPRTQ15274 297 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ERN2Q76MJ5 926 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF557Q8N988 423 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 OR9A2Q8NGT5 310 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 RSPRY1Q96DX4 576 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FRMD6Q96NE9 622 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 OR2B2Q9GZK3 357 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ENTPD4Q9Y227 616 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FCMRO60667 390 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 TSC22D2O75157 780 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 EPPINO95925 133 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 CLTBP09497 229 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FUT1P19526 365 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ITGB7P26010 798 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 P2RY2P41231 377 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 HYAL2Q12891 473 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ELAVL3Q14576 367 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 HNRNPA1L2Q32P51 320 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF658BQ4V348 819 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 IL20RBQ6UXL0 311 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 FAM92BQ6ZTR7 304 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 NKAIN4Q8IVV8 208 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 OR51G2Q8NGK0 314 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 SLC38A2Q96QD8 506 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 WACQ9BTA9 647 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 MBNL1Q9NR56 388 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 DIMT1Q9UNQ2 313 aaKnown RBP13.73□□□□□ -0.21
SCARB2-221ENST00000640341 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
SCARB2-221ENST00000640341 HEATR5BQ9P2D3 2071 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms