RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PRIMA1Q86XR5 153 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FUNDC1Q8IVP5 155 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 STHQ8IWL8 128 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ZC3H3Q8IXZ2 948 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 GSPT2Q8IYD1 628 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM71AQ8IYT1 594 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CYP4Z2PQ8N1L4 340 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CCDC71LQ8N9Z2 235 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC37A3Q8NCC5 494 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TMEM35BQ8NCS4 154 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM46DQ8NEK8 389 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ENGASEQ8NFI3 743 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 OR5B17Q8NGF7 314 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 OR9G4Q8NGQ1 327 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 OR1L4Q8NGR5 311 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 LHFPL5Q8TAF8 219 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NANPQ8TBE9 248 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 RAET1EQ8TD07 263 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MAGEC3Q8TD91 643 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ACTRT1Q8TDG2 376 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM222BQ8WU58 562 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 U2AF1L4Q8WU68 220 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM172AQ8WUF8 416 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FAR1Q8WVX9 515 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ASB5Q8WWX0 329 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CASKIN2Q8WXE0 1202 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ACOT11Q8WXI4 607 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 SORCS1Q8WY21 1168 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MAFIPQ8WZ33 124 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ST8SIA2Q92186 375 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 KCNJ9Q92806 393 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SMARCD2Q92925 531 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 LHX4Q969G2 390 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 GLYATL1Q969I3 302 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 BORCS5Q969J3 196 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 S100PBPQ96BU1 408 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MOAP1Q96BY2 351 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 COQ8BQ96D53 544 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 STAMBPL1Q96FJ0 436 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ZNF668Q96K58 619 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 MYADMQ96S97 322 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TEAD3Q99594 435 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NPAS1Q99742 590 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 UTP23Q9BRU9 249 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 GSDMCQ9BYG8 508 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TPSD1Q9BZJ3 242 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ZYG11BQ9C0D3 744 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ALX4Q9H161 411 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 METTL9Q9H1A3 318 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 GANQ9H2C0 597 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PPIL3Q9H2H8 161 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 PIGUQ9H490 435 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NARFLQ9H6Q4 476 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 UBTD1Q9HAC8 227 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ELOVL3Q9HB03 270 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MLXIPLQ9NP71 852 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC39A2Q9NP94 309 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MYOZ1Q9NP98 299 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 EQTNQ9NQ60 294 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 GID8Q9NWU2 228 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 BABAM1Q9NWV8 329 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 USE1Q9NZ43 259 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 IFNKQ9P0W0 207 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 COPS7AQ9UBW8 275 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ANAPC7Q9UJX3 599 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC45A2Q9UMX9 530 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PPP1R3CQ9UQK1 317 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ACOT9Q9Y305 439 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MMACHCQ9Y4U1 282 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CSDC2Q9Y534 153 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC22A7Q9Y694 548 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 EIF3AQ14152 1382 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 TNRQ92752 1358 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 UMODL1Q5DID0 1318 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NRCAMQ92823 1304 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TRBV11-1A0A0K0K1C0 115 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 A0A1B0GVG6 124 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 A0A1W2PPQ1 181 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TMEM129A0AVI4 362 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SLC5A10A0PJK1 596 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ILVBLA1L0T0 632 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 OR5K3A6NET4 321 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 A8MU76 341 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 C17orf100A8MU93 164 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF99A8MXY4 864 aaPredicted RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 LINC00587B1AMM8 73 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF487B1APH4 448 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 F8W036 122 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 H0YGN5 161 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 H7C0C1 242 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TMEM189-UBE2V1I3L0A0 370 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SIVA1O15304 175 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TM9SF1O15321 606 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SLC31A2O15432 143 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 FLRT2O43155 660 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 OR10H3O60404 316 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CDC14BO60729 498 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CUTAO60888 179 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PMPCBO75439 489 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 RBMXL2O75526 392 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms