RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SLX1AQ9BQ83 275 aa13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 SIKE1Q9BRV8 207 aa13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 TCF7L2Q9NQB0 619 aa13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 VPS4AQ9UN37 437 aa13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 CHCHD2Q9Y6H1 151 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 EXPH5Q8NEV8 1989 aa13.59□□□□□ -0.23
CDC42BPB-209ENST00000634889 TP53I11O14683 189 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 UBDO15205 165 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 POLR3GO15318 223 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 EMC8O43402 210 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PEX1O43933 1283 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PPM1BO75688 479 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 CCL3P10147 92 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 CNR1P21554 472 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 IDH3AP50213 366 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 CORO7P57737 925 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PSG6Q00889 435 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PLCXD2Q0VAA5 305 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 IGFBP7Q16270 282 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PDCD4Q53EL6 469 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 GK5Q6ZS86 529 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC34A3Q8N130 599 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 GLB1L3Q8NCI6 653 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAM13CQ8NE31 585 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 HOXB13Q92826 284 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 OMA1Q96E52 524 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 MAGED4Q96JG8 741 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAM173AQ9BQD7 235 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 LMF2Q9BU23 707 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 CCDC28BQ9BUN5 200 aa13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 SDR39U1Q9NRG7 319 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-209ENST00000634889 SHANK1Q9Y566 2161 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 DYNC1I1O14576 645 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ABCB7O75027 752 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 C6orf47O95873 294 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ABCB1P08183 1280 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 EDN3P14138 238 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZNF24P17028 368 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 MRPL19P49406 292 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 MEOX1P50221 254 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 AQP5P55064 265 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 WNT3P56703 355 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 FBXW4P57775 412 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 IRX1P78414 480 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 PMP22Q01453 160 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAM174BQ3ZCQ3 159 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 VPS26BQ4G0F5 336 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 CYP27C1Q4G0S4 372 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ANXA8L1Q5VT79 327 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 TMEM198Q66K66 360 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR4F3Q6IEY1 312 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 TMEM81Q6P7N7 255 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZCCHC12Q6PEW1 402 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 NPSR1Q6W5P4 371 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 NUP54Q7Z3B4 507 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 PRR22Q8IZ63 422 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 CPSF7Q8N684 471 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 CDRT4Q8N9R6 151 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ST6GALNAC3Q8NDV1 305 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 NUP43Q8NFH3 380 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR2M7Q8NG81 312 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR10G3Q8NGC4 313 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 SFXN5Q8TD22 340 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 NUDT8Q8WV74 236 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 MOAP1Q96BY2 351 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAM120BQ96EK7 910 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 TEX37Q96LM6 180 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 CCDC134Q9H6E4 229 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 Q9N2J8 555 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 DEPPQ9NTK1 212 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZCCHC3Q9NUD5 404 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAM120CQ9NX05 1096 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZIM2Q9NZV7 527 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 CNOT11Q9UKZ1 510 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
CDC42BPB-209ENST00000634889 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 PRSS51A0A1B0GVH4 220 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 CFLARO15519 480 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC22A3O75751 556 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 S100A3P33764 101 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 KRT20P35900 424 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 MAP3K8P41279 467 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 GPR85P60893 370 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 UFM1P61960 85 aa13.56□□□□□ -0.24
CDC42BPB-209ENST00000634889 HBA1P69905 142 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms