RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PCYOX1LQ8NBM8 494 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CD200R1Q8TD46 325 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TRPC4APQ8TEL6 797 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ZFPM2Q8WW38 1151 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 EXT2Q93063 718 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ULK4Q96C45 1275 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OR2A14Q96R47 310 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GPR21Q99679 349 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 HOPXQ9BPY8 73 aaPredicted RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SLC39A3Q9BRY0 314 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 MRPS26Q9BYN8 205 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SLC22A11Q9NSA0 550 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CUTCQ9NTM9 273 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 AIG1Q9NVV5 245 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TMEM45AQ9NWC5 275 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SMOXQ9NWM0 555 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GALPQ9UBC7 116 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GIMAP2Q9UG22 337 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TMCO1Q9UM00 188 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PLCL2Q9UPR0 1127 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 HS3ST3B1Q9Y662 390 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 NBEAL1Q6ZS30 2694 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 A0A1B0GX78 115 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 NPEPPSL1A6NEC2 478 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 AQP12BA6NM10 295 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SYCE1LA8MT33 242 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SUPT3HB4E1H0 165 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CDC7O00311 574 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 NR5A2O00482 541 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SUPT3HO75486 399 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SEC24DO94855 1032 aaPredicted RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TNFAIP8O95379 198 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 IGHEP01854 428 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GFAPP14136 432 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PKMP14618 531 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 COX6B1P14854 86 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 IDO1P14902 403 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PSMB5P28074 263 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 HTR1EP28566 365 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 FMO4P31512 558 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 EGR3Q06889 387 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 BNIP2Q12982 314 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 RCAN2Q14206 197 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TSNQ15631 228 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 MTX3Q5HYI7 312 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 B3GNTL1Q67FW5 361 aaPredicted RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ISLR2Q6UXK2 745 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SPATA19Q7Z5L4 167 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SATL1Q86VE3 508 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 AQP12AQ8IXF9 295 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SLC15A3Q8IY34 581 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 METTL25Q8N6Q8 603 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OR11G2Q8NGC1 345 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TBC1D20Q96BZ9 403 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 LHPPQ9H008 270 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 P2RY12Q9H244 342 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 KLHL1Q9NR64 748 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CMTM6Q9NX76 183 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ANKRD10Q9NXR5 420 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 NDUFA13Q9P0J0 144 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TRPC4Q9UBN4 977 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TNFRSF10DQ9UBN6 386 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 C3orf18Q9UK00 162 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ENTPD4Q9Y227 616 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 RNF11Q9Y3C5 154 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 COMMD3-BMI1R4GMX3 469 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 B9A039 149 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ESRRBO95718 433 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CELA2AP08217 269 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SLC6A2P23975 617 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ACRV1P26436 265 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 RPL5P46777 297 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 YBX1P67809 324 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PMS2P11Q13670 270 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PDCD4Q53EL6 469 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 FCRLBQ6BAA4 426 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GDF7Q7Z4P5 450 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ADCK2Q7Z695 626 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 DHFR2Q86XF0 187 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CARFQ8N187 725 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OR2T11Q8NH01 316 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 FAM110BQ8TC76 370 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PROKR1Q8TCW9 393 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 BRIX1Q8TDN6 353 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 KCNJ9Q92806 393 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TMEM125Q96AQ2 219 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF382Q96SR6 550 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OSBPL11Q9BXB4 747 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TRIM54Q9BYV2 358 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 MUC13Q9H3R2 512 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 COQ10BQ9H8M1 238 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CORO2BQ9UQ03 480 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 COL6A5A8TX70 2615 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 NSG1A0A0A6YYJ2 146 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 A0A1W2PP18 115 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF839A8K0R7 811 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 E2F3O00716 465 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 DLGAP1O14490 977 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NIPSNAP2O75323 286 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NDUFS3O75489 264 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms