RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 FAM111BQ6SJ93 734 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 HIPK1Q86Z02 1210 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 OR7G2Q8NG99 324 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SFXN5Q8TD22 340 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 DOK4Q8TEW6 326 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 GIMAP5Q96F15 307 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MUS81Q96NY9 551 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 TREX2Q9BQ50 279 aaPredicted RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 CCDC3Q9BQI4 270 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SEMA3GQ9NS98 782 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 CRNNQ9UBG3 495 aaPredicted RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 TRPC4Q9UBN4 977 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SAMHD1Q9Y3Z3 626 aaKnown RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 RNF215Q9Y6U7 377 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 IGHV5-51A0A0C4DH38 117 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 A6NL46 340 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 DNAJA1P31689 397 aaKnown RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 NR4A2P43354 598 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 GABRA4P48169 554 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 SHBQ15464 509 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 WDR53Q7Z5U6 358 aaPredicted RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 COMTD1Q86VU5 262 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 BPHLQ86WA6 291 aaPredicted RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 CA13Q8N1Q1 262 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 OR9A4Q8NGU2 314 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 COL26A1Q96A83 441 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 CPNE5Q9HCH3 593 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 LYRM4Q9HD34 91 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 FAM118AQ9NWS6 357 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 PCDHGA3Q9Y5H0 932 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 TECTAO75443 2155 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 TNRC6BQ9UPQ9 1833 aaKnown RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 FAM172BPA6NC97 362 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 FHP07954 510 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 FPR1P21462 350 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 RRM2P31350 389 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 SHC2P98077 582 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 KCNAB2Q13303 367 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 PRTGQ2VWP7 1150 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 C6orf132Q5T0Z8 1188 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 BROXQ5VW32 411 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 CLIP4Q8N3C7 705 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 OR4K14Q8NGD5 310 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 TGM7Q96PF1 710 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 ZNF300Q96RE9 604 aaPredicted RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 LHPPQ9H008 270 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 GABARAPL1Q9H0R8 117 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 GIMAP4Q9NUV9 329 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 THUMPD1Q9NXG2 353 aaKnown RBP17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 BAG5Q9UL15 447 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 TESMINQ9Y4I5 508 aa17.31■□□□□ 0.36
PCDHB2-202ENST00000622947 C5orf58C9J3I9 102 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 SLC28A2O43868 658 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 FGF17O60258 216 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 DPM1O60762 260 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 SEMA7AO75326 666 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 RDH16O75452 317 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 CHRM4P08173 479 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 TDGF1P13385 188 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 ALDH4A1P30038 563 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 MAN2A2P49641 1150 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 WDR45BQ5MNZ6 344 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 MAMSTRQ6ZN01 415 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 GALNT5Q7Z7M9 940 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 SLC22A16Q86VW1 577 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 ARMC8Q8IUR7 673 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 SLC30A8Q8IWU4 369 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 LRRC25Q8N386 305 aaPredicted RBP17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 ZNF655Q8N720 491 aaPredicted RBP17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 NUP43Q8NFH3 380 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 EQTNQ9NQ60 294 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 PDP1Q9P0J1 537 aaPredicted RBP17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 ZDBF2Q9HCK1 2354 aa17.3■□□□□ 0.36
PCDHB2-202ENST00000622947 LOC105371267A0A1B0GV96 52 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 EMC8O43402 210 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 ASNA1O43681 348 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 BCAS1O75363 584 aaPredicted RBP17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 CHRNEQ04844 493 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 XAF1Q6GPH4 301 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 USP53Q70EK8 1073 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 REEP1Q9H902 201 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 THSD1Q9NS62 852 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 MS4A12Q9NXJ0 267 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 LRIT1Q9P2V4 623 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 P2RX2Q9UBL9 471 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 SATB2Q9UPW6 733 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 LYVE1Q9Y5Y7 322 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 ZNF10P21506 573 aaPredicted RBP17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 CTSKP43235 329 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 NKX2-5P52952 324 aaPredicted RBP17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 OR1D5P58170 312 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 ZXDAP98168 799 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 CFHR1Q03591 330 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 TTC23Q5W5X9 447 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 KDM4DQ6B0I6 523 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 SNX29P2Q8IUI4 249 aa17.29■□□□□ 0.36
PCDHB2-202ENST00000622947 SLC35F3Q8IY50 421 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms