RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 KCNJ2P63252 427 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 RPP38P78345 283 aaKnown RBP22.86■■□□□ 1.25
PMS1-220ENST00000618056 HHATQ5VTY9 493 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 FGD2Q7Z6J4 655 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 PRR22Q8IZ63 422 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 FAM109AQ8N4B1 249 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 TMEM251Q8N6I4 163 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 ZNF781Q8N8C0 355 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 DIO2Q92813 273 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 PPCDCQ96CD2 204 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 ZFP64Q9NPA5 681 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 BOKQ9UMX3 212 aaPredicted RBP22.86■■□□□ 1.25
PMS1-220ENST00000618056 C19orf53Q9UNZ5 99 aaPredicted RBP22.86■■□□□ 1.25
PMS1-220ENST00000618056 NBPF19A0A087WUL8 3843 aa22.86■■□□□ 1.25
PMS1-220ENST00000618056 AKAP10O43572 662 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 COQ9O75208 318 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CT45A8P0DMV1 189 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CT45A9P0DMV2 189 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 ABOP16442 354 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 MC3RP41968 323 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 WDR4P57081 412 aaKnown RBP22.85■■□□□ 1.25
PMS1-220ENST00000618056 C3AR1Q16581 482 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CT45A2Q5DJT8 189 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 ARHGAP11AQ6P4F7 1023 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 TMEM81Q6P7N7 255 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 PAOXQ6QHF9 649 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 SLC34A3Q8N130 599 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 OR2L13Q8N349 312 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CLHC1Q8NHS4 586 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 OMA1Q96E52 524 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 DOHHQ9BU89 302 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 VIPAS39Q9H9C1 493 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 FOLH1BQ9HBA9 442 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 A0A1B0GTH9 108 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CCL21O00585 134 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 PDPK1O15530 556 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 CDC40O60508 579 aaKnown RBP eCLIP22.85■■□□□ 1.25
PMS1-220ENST00000618056 ERN1O75460 977 aaKnown RBP22.85■■□□□ 1.25
PMS1-220ENST00000618056 LRATO95237 230 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 PSMG1O95456 288 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 IGHG3P01860 377 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 FRKP42685 505 aaPredicted RBP22.85■■□□□ 1.25
PMS1-220ENST00000618056 MAGOHP61326 146 aaKnown RBP22.85■■□□□ 1.25
PMS1-220ENST00000618056 PLCXD2Q0VAA5 305 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 STX3Q13277 289 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 ZNF385BQ569K4 471 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 MTFR2Q6P444 385 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 TMEM107Q6UX40 140 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 NUP54Q7Z3B4 507 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 R3HCC1LQ7Z5L2 792 aaKnown RBP22.85■■□□□ 1.25
PMS1-220ENST00000618056 ANKRD42Q8N9B4 389 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 NTNG2Q96CW9 530 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 ELP4Q96EB1 424 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 ANGPTL4Q9BY76 406 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 DEFB127Q9H1M4 99 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 TINAGQ9UJW2 476 aa22.85■■□□□ 1.25
PMS1-220ENST00000618056 PHF3Q92576 2039 aaKnown RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 CENPEQ02224 2701 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 LRRC3CA6NJW4 275 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 UPK1AO00322 258 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 TRIM3O75382 744 aaPredicted RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 SNX4O95219 450 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 PRPS2P11908 318 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 GP1BBP13224 206 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 PTGS2P35354 604 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 CASP3P42574 277 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 MAGEA5P43359 124 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 RPL14P50914 215 aaKnown RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 SMU1Q2TAY7 513 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 ANKRD26P1Q6NSI1 321 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 LIX1Q8N485 282 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 FNDC5Q8NAU1 212 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 HGDQ93099 445 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 TUBGCP3Q96CW5 907 aa22.84■■□□□ 1.25
PMS1-220ENST00000618056 ZBED6CLQ96FA7 236 aaPredicted RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 PAIP2Q9BPZ3 127 aaKnown RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 ZNF703Q9H7S9 590 aaPredicted RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 ACSS1Q9NUB1 689 aaPredicted RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 SUCOQ9UBS9 1254 aaKnown RBP22.84■■□□□ 1.25
PMS1-220ENST00000618056 CACNA1CQ13936 2221 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 PRRG2O14669 202 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 ZG16O60844 167 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 DDX5P17844 614 aaKnown RBP22.83■■□□□ 1.25
PMS1-220ENST00000618056 RPL3P39023 403 aaKnown RBP22.83■■□□□ 1.25
PMS1-220ENST00000618056 CORO7P57737 925 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 BST1Q10588 318 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 ZFP28Q8NHY6 868 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 FAM57AQ8TBR7 257 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 CIDECQ96AQ7 238 aaPredicted RBP22.83■■□□□ 1.25
PMS1-220ENST00000618056 ZNF597Q96LX8 424 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 RILPQ96NA2 401 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 C1orf50Q9BV19 199 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 DDX18Q9NVP1 670 aaKnown RBP22.83■■□□□ 1.25
PMS1-220ENST00000618056 QPCTLQ9NXS2 382 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 SH3BP4Q9P0V3 963 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 ATP6V1HQ9UI12 483 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 SH3BGRL2Q9UJC5 107 aa22.83■■□□□ 1.25
PMS1-220ENST00000618056 A0A1B0GVC2 190 aa22.82■■□□□ 1.24
PMS1-220ENST00000618056 OR6C70A6NIJ9 312 aa22.82■■□□□ 1.24
PMS1-220ENST00000618056 SCAMP2O15127 329 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms