RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PLATP00750 562 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 MSL3P1P0C860 447 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 SPINT3P49223 89 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 DLX2Q07687 328 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 HACD4Q5VWC8 232 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CCDC71LQ8N9Z2 235 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 KLHL42Q9P2K6 505 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 GPR34Q9UPC5 381 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 DNAJC15Q9Y5T4 150 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 UPK1BO75841 260 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 MMP2P08253 660 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 NAA10P41227 235 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 PITPNBP48739 271 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 RAB28P51157 221 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 TAS2R31P59538 309 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 TMEM68Q96MH6 324 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 KCNS2Q9ULS6 477 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 NUBP2Q9Y5Y2 271 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 PRAMEF2O60811 474 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 AAK1Q2M2I8 961 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 BCL2L15Q5TBC7 163 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 C1orf94Q6P1W5 598 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 ZDHHC1Q8WTX9 485 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 TCTEX1D2Q8WW35 142 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 LHPPQ9H008 270 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 PCDHGA8Q9Y5G5 932 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 TOXO94900 526 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 SLC6A8P48029 635 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 SLC10A2Q12908 348 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 MELKQ14680 651 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 OR4D1Q15615 310 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 PM20D1Q6GTS8 502 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CNTNAP3BQ96NU0 1288 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 F2RL3Q96RI0 385 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 GOSR2O14653 212 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CASC3O15234 703 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 GPR37L1O60883 481 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 PCGF2P35227 344 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CLDN10P78369 228 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 GRM7Q14831 915 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 KRBOX4Q5JUW0 171 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 ZC3H14Q6PJT7 736 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 ADAMTS16Q8TE57 1224 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 ADAMTS19Q8TE59 1207 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 C7orf50Q9BRJ6 194 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 CACNG6Q9BXT2 260 aa16.56■□□□□ 0.24
HMGXB3-206ENST00000613459 SC5DO75845 299 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 MICAQ29983 383 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 CDHR3Q6ZTQ4 885 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 FIBINQ8TAL6 211 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 TMEM19Q96HH6 336 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 ARHGAP39Q9C0H5 1083 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 LDB2O43679 373 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 IFNA4P05014 189 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 SERTAD2Q14140 314 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 DEFB134Q4QY38 66 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 DUS1LQ6P1R4 473 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 CNOT9Q92600 299 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 SERINC2Q96SA4 455 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 RDH14Q9HBH5 336 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 KCNIP1Q9NZI2 227 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 SLC26A5P58743 744 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 ENPP6Q6UWR7 440 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 PAPD5Q8NDF8 572 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 POC1BQ8TC44 478 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 C2orf42Q9NWW7 574 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 ZNF175Q9Y473 711 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 IGKV6-21A0A0C4DH24 114 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 SCO2O43819 266 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 GTPBP8Q8N3Z3 284 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 NAXEQ8NCW5 288 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 OR7G2Q8NG99 324 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 NANOS1Q8WY41 292 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 ZNF486Q96H40 463 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 MS4A4EQ96PG1 132 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 SDR39U1Q9NRG7 319 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 GPR83Q9NYM4 423 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 MARCH4Q9P2E8 410 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 OR1A2Q9Y585 309 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 LRRC37A3O60309 1634 aa16.55■□□□□ 0.24
HMGXB3-206ENST00000613459 A6NIZ1 184 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 LYRM1O43325 122 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 PNMTP11086 282 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 RAP1BP61224 184 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 RAP1AP62834 184 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 JAG1P78504 1218 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 SLC41A3Q96GZ6 507 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 FEVQ99581 238 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 ENTPD2Q9Y5L3 495 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 GPR32O75388 356 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 GGT2P36268 569 aa16.54■□□□□ 0.24
HMGXB3-206ENST00000613459 LSSP48449 732 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms