RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	DEDD2	Q8WXF8	326 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	OR2B2	Q9GZK3	357 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	IL21R	Q9HBE5	538 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	RDH14	Q9HBH5	336 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	C12orf4	Q9NQ89	552 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	ANKMY1	Q9P2S6	941 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	PCDHGA2	Q9Y5H1	932 aa		13.13	□□□□□ -0.31
MUC1-223	ENST00000611571	MAST2	Q6P0Q8	1798 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	CCL5	P13501	91 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	NDUFV2	P19404	249 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	AK4	P27144	223 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	IMPA1	P29218	277 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	GIPR	P48546	466 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	PPP3R1	P63098	170 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	AGAP6	Q5VW22	663 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SMPDL3B	Q92485	455 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	EFHD2	Q96C19	240 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	AGAP4	Q96P64	663 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	MYEF2	Q9P2K5	600 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	PCM1	Q15154	2024 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SVIL	O95425	2214 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TRBV2	A0A0J9YWF9	115 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	NUPL2	O15504	423 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	CD2	P06729	351 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	CD3G	P09693	182 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	C1S	P09871	688 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	MAP3K8	P41279	467 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	WNT4	P56705	351 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	GAB1	Q13480	694 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	ZNF234	Q14588	700 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TMEM44	Q2T9K0	475 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	GALNT7	Q86SF2	657 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SLITRK4	Q8IW52	837 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	ASB15	Q8WXK1	588 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TSACC	Q96A04	125 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	ITPKC	Q96DU7	683 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TREX2	Q9BQ50	279 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	DDX31	Q9H8H2	851 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	IGLV3-10	A0A075B6K4	115 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	LYRM1	O43325	122 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TIMP2	P16035	220 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	RPL34	P49207	117 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	PIP5KL1	Q5T9C9	394 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	OR4C11	Q6IEV9	310 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TMEFF1	Q8IYR6	380 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	DNAJC5G	Q8N7S2	189 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	LSM14A	Q8ND56	463 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	OR52E2	Q8NGJ4	325 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	CASTOR1	Q8WTX7	329 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SLC38A5	Q8WUX1	472 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	ZMYND19	Q96E35	227 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	EPYC	Q99645	322 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	TRIM2	Q9C040	744 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	SAP130	Q9H0E3	1048 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	RNF121	Q9H920	327 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	NDUFAF4	Q9P032	175 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	PRELID1	Q9Y255	219 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	AK6	Q9Y3D8	172 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	GRIP1	Q9Y3R0	1128 aa		13.12	□□□□□ -0.31
MUC1-223	ENST00000611571	CARNS1	A5YM72	827 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	C5orf51	A6NDU8	294 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	ITGAM	P11215	1152 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	EPCAM	P16422	314 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	TGM4	P49221	684 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	PITPNA	Q00169	270 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	GAS6	Q14393	721 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	SLC25A24	Q6NUK1	477 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	METTL2B	Q6P1Q9	378 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	GAREM2	Q75VX8	874 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	PARS2	Q7L3T8	475 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	OR6N2	Q8NGY6	317 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	MBOAT4	Q96T53	435 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	OR10A4	Q9H209	315 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	THSD1	Q9NS62	852 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	MARCH5	Q9NX47	278 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	RWDD3	Q9Y3V2	267 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	PCDHGA3	Q9Y5H0	932 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	CEP250	Q9BV73	2442 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	GRXCR2	A6NFK2	248 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	GABARAP	O95166	117 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	PTGS2	P35354	604 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	CXCR4	P61073	352 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	TBCE	Q15813	527 aa	Predicted RBP	13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	CST9	Q5W186	159 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	TRIM46	Q7Z4K8	759 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	PEG10	Q86TG7	708 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	LINC00471	Q8N535	108 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	SUN3	Q8TAQ9	357 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	SNAPC3	Q92966	411 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	C16orf58	Q96GQ5	468 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	MED20	Q9H944	212 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	NTN4	Q9HB63	628 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	VNN3	Q9NY84	501 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	SH3D21	A4FU49	640 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	RNASET2	O00584	256 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	EMC8	O43402	210 aa		13.11	□□□□□ -0.31
MUC1-223	ENST00000611571	IFNA7	P01567	189 aa		13.11	□□□□□ -0.31

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