RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SCN2AQ99250 2005 aa14.39□□□□□ -0.11
UPF1-206ENST00000598471 SEC16AO15027 2179 aa14.39□□□□□ -0.11
UPF1-206ENST00000598471 AQP12BA6NM10 295 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 OR6C76A6NM76 312 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 CDRT15L2A8MXV6 281 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 SLC28A2O43868 658 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
UPF1-206ENST00000598471 DDAH2O95865 285 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 AK1P00568 194 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 NR2F1P10589 423 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 NCK1P16333 377 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 SOX18P35713 384 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 FOXL2P58012 376 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 REEP3Q6NUK4 255 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 PAPD4Q6PIY7 484 aaKnown RBP14.38□□□□□ -0.11
UPF1-206ENST00000598471 CYP2R1Q6VVX0 501 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 AQP12AQ8IXF9 295 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 COX18Q8N8Q8 333 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 OR5D16Q8NGK9 328 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 NFKBIDQ8NI38 313 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 RAB8BQ92930 207 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 PIGUQ9H490 435 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 GORASP2Q9H8Y8 452 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 FOLH1BQ9HBA9 442 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 DUSP22Q9NRW4 184 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 CALML5Q9NZT1 146 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 KCND3Q9UK17 655 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 TCFL5Q9UL49 500 aa14.38□□□□□ -0.11
UPF1-206ENST00000598471 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
UPF1-206ENST00000598471 LOC102723996A0A087X1L8 192 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 A8MUI8 341 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 HRKO00198 91 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 CREG1O75629 220 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 PDE9AO76083 593 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 DXOO77932 396 aaKnown RBP14.37□□□□□ -0.11
UPF1-206ENST00000598471 IFNA14P01570 189 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 IGKV3-11P04433 115 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 BCHEP06276 602 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 UMODP07911 640 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 ACP2P11117 423 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 ATP6V1B2P21281 511 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 DLSTP36957 453 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 MAN2A2P49641 1150 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 EMDP50402 254 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 CRISP3P54108 245 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
UPF1-206ENST00000598471 HLA-DQA1Q5Y7H0 255 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 SLC29A4Q7RTT9 530 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 SLC44A2Q8IWA5 706 aaPredicted RBP14.37□□□□□ -0.11
UPF1-206ENST00000598471 IL22RA1Q8N6P7 574 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 GOLM1Q8NBJ4 401 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 B3GNT7Q8NFL0 401 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 OR52E4Q8NGH9 312 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 GPR151Q8TDV0 419 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 MAL2Q969L2 176 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 KIAA1143Q96AT1 154 aaPredicted RBP14.37□□□□□ -0.11
UPF1-206ENST00000598471 NXPE2Q96DL1 559 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 TMEM19Q96HH6 336 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 RNF145Q96MT1 663 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 LMF2Q9BU23 707 aaKnown RBP14.37□□□□□ -0.11
UPF1-206ENST00000598471 Q9N2J8 555 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 AK5Q9Y6K8 562 aa14.37□□□□□ -0.11
UPF1-206ENST00000598471 IGHV3-20A0A0C4DH32 117 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 NKX2-2O95096 273 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 TFPTP0C1Z6 253 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 MMP11P24347 488 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 CLCN2P51788 898 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SLC37A1P57057 533 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 DCAF7P61962 342 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 POU6F2P78424 691 aaPredicted RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 DUSP8Q13202 625 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 CCNIQ14094 377 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SSPNQ14714 243 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 MYBPC3Q14896 1274 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 RTP5Q14D33 572 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 DUSP5Q16690 384 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 GPAT3Q53EU6 434 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 LRRC23Q53EV4 343 aaPredicted RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 EXOSC6Q5RKV6 272 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 PRAMEF8Q5VWM4 474 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 PRAMEF7Q5VXH5 474 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 PATL1Q86TB9 770 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 KRT73Q86Y46 540 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SPPL2CQ8IUH8 684 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 EID3Q8N140 333 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SIMC1Q8NDZ2 872 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 C16orf52Q8NHV5 167 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 BBS10Q8TAM1 723 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SLC26A7Q8TE54 656 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 ZNF721Q8TF20 911 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 SLC38A5Q8WUX1 472 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 CDS1Q92903 461 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 NACC2Q96BF6 587 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 OTUB1Q96FW1 271 aaPredicted RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 SLC35A4Q96G79 324 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms