RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 ANKRD53Q8N9V6 530 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 TM4SF18Q96CE8 201 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 NUS1Q96E22 293 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 C16orf58Q96GQ5 468 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZNF354BQ96LW1 612 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZNF582Q96NG8 517 aaPredicted RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 KLHL1Q9NR64 748 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 CSNK1G3Q9Y6M4 447 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 AKR7A2O43488 359 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 HMGA2P52926 109 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 CTBP2P56545 445 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 HYAL2Q12891 473 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 WSCD2Q2TBF2 565 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 C9orf64Q5T6V5 341 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 SAXO2Q658L1 398 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 KRT74Q7RTS7 529 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 GOT1L1Q8NHS2 421 aaPredicted RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 CREB3L4Q8TEY5 395 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 UFD1Q92890 307 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 SLC25A46Q96AG3 418 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 RAD51AP1Q96B01 352 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZG16BQ96DA0 208 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 SLC25A19Q9HC21 320 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 GRIP1Q9Y3R0 1128 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 SPTBP11277 2137 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 PDE9AO76083 593 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 LIMS1P48059 325 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 GPR68Q15743 365 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 Q5BKY6 102 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 FCRL4Q96PJ5 515 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 DCLRE1CQ96SD1 692 aaKnown RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 AIF1LQ9BQI0 150 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 KATNB1Q9BVA0 655 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZCCHC2Q9C0B9 1178 aaKnown RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 NDUFB11Q9NX14 153 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 P2RX2Q9UBL9 471 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 KCNN3Q9UGI6 736 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 FOXE1O00358 373 aaPredicted RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 DVL2O14641 736 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 HRO43593 1189 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 PCSK2P16519 638 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 WNT4P56705 351 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 RPS7P62081 194 aaKnown RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 FABP5Q01469 135 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 MLLT11Q13015 90 aaPredicted RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 IDNKQ5T6J7 187 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 VWA5B2Q8N398 1253 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 LSMEM1Q8N8F7 131 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 OR5P2Q8WZ92 322 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 PTGFRNQ9P2B2 879 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 IRAK3Q9Y616 596 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 H0YC42 278 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 HYAL3O43820 417 aaPredicted RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 CTSAP10619 480 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 C6P13671 934 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 MMP12P39900 470 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 ETV6P41212 452 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 MTNR1AP48039 350 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 CLCNKAP51800 687 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 CDH11P55287 796 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 ZNF33BQ06732 778 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 BTN1A1Q13410 526 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 SUZ12Q15022 739 aaKnown RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 KLHL12Q53G59 568 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 TMEM107Q6UX40 140 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 TMC8Q8IU68 726 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 FAM109AQ8N4B1 249 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 UBE2E3Q969T4 207 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 LSM2Q9Y333 95 aaKnown RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 ALPK2Q86TB3 2170 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 SERTM1A2A2V5 107 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 HMX3A6NHT5 357 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 FGF18O76093 207 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 IRS1P35568 1242 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 KCNJ5P48544 419 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 PDE7AQ13946 482 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 HSDL2Q6YN16 418 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 ZNF547Q8IVP9 402 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 PLA2G15Q8NCC3 412 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 OR8K5Q8NH50 307 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 NEIL3Q8TAT5 605 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 ZFPM2Q8WW38 1151 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 RASSF5Q8WWW0 418 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 SAP130Q9H0E3 1048 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 PLEKHB1Q9UF11 243 aaPredicted RBP14.39□□□□□ -0.11
UPF1-204ENST00000596842 SLC23A2Q9UGH3 650 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 F5P12259 2224 aa14.39□□□□□ -0.11
UPF1-204ENST00000596842 A0A1W2PRG6 482 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 PCDH8O95206 1070 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 MAP2K3P46734 347 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 NDUFAF5Q5TEU4 345 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 KLBQ86Z14 1044 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 NEURL3Q96EH8 262 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 ZSWIM3Q96MP5 696 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 DPH7Q9BTV6 452 aa14.38□□□□□ -0.11
UPF1-204ENST00000596842 SERHL2Q9H4I8 314 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms