RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 LIPEQ05469 1076 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 EEF1A2Q05639 463 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 BIKQ13323 160 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 SERTAD2Q14140 314 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 FLOT2Q14254 428 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 KPNB1Q14974 876 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 FXNQ16595 210 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 MPEG1Q2M385 716 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 RABL3Q5HYI8 236 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 DNAJC14Q6Y2X3 702 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 LANCL3Q6ZV70 420 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 CPEB2Q7Z5Q1 589 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 OR4N5Q8IXE1 308 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 MMP21Q8N119 569 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 OR4K14Q8NGD5 310 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 PSMA8Q8TAA3 256 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 UCN3Q969E3 161 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 CIDECQ96AQ7 238 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 EXOSC8Q96B26 276 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 ANKRD9Q96BM1 317 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 CCDC124Q96CT7 223 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 BBS4Q96RK4 519 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 KCTD14Q9BQ13 255 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 ALOXE3Q9BYJ1 711 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 KAT8Q9H7Z6 458 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 PNO1Q9NRX1 252 aaKnown RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF780BQ9Y6R6 833 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 MED13Q9UHV7 2174 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 MYOCOSA0A1B0GUC4 107 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 TCRBV16S1A1N1A0A5B0 115 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 A8MUI8 341 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ACOT8O14734 319 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 FKBP6O75344 327 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ERAL1O75616 437 aaKnown RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 KRT75O95678 551 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 GSNP06396 782 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ABCB1P08183 1280 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 CSNK2A2P19784 350 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 MPIP34949 423 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 MAGEA8P43361 318 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 RRADP55042 308 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 PRSS53Q2L4Q9 553 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 SFT2D3Q587I9 215 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ASB18Q6ZVZ8 466 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 NDUFAF7Q7L592 441 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 SERPINA11Q86U17 422 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 SLC34A3Q8N130 599 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 RNF148Q8N7C7 305 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 GOLM1Q8NBJ4 401 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 OR11G2Q8NGC1 345 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 PRR7Q8TB68 274 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ZFP90Q8TF47 636 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 WDR60Q8WVS4 1066 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 STMN2Q93045 179 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 POP5Q969H6 163 aaKnown RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 MOAP1Q96BY2 351 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 FAM120BQ96EK7 910 aaKnown RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 RBM18Q96H35 190 aaKnown RBP11.07□□□□□ -0.64
DDX39A-219ENST00000592927 FER1L6-AS2Q96M78 137 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 DGAT2Q96PD7 388 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 LPAR4Q99677 370 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 MESP1Q9BRJ9 268 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ZNF700Q9H0M5 742 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 TPT1P8Q9HAU6 139 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 SLC6A13Q9NSD5 602 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 C5AR2Q9P296 337 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 FBXL4Q9UKA2 621 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 PACSIN3Q9UKS6 424 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
DDX39A-219ENST00000592927 IGHV1-45A0A0A0MS14 117 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 NSG1A0A0A6YYJ2 146 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 IGHV3-20A0A0C4DH32 117 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 A0A1W2PQ72 361 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ARGFXA6NJG6 315 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 A8MUA0 341 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 FAM220BPB1ANY3 271 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 OR10H2O60403 315 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 GMNNO75496 209 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SEC24DO94855 1032 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SORBS2O94875 1100 aaKnown RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 HPP00738 406 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 LDLRP01130 860 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 IFI6P09912 130 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 COX6A1P12074 109 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 GPX2P18283 190 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 TNNI3P19429 210 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 TCN1P20061 433 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 XKP51811 444 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 IGLV3-21P80748 117 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 MS4A2Q01362 244 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 FADDQ13158 208 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 SELPLGQ14242 412 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 PCOLCEQ15113 449 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
DDX39A-219ENST00000592927 GTDC1Q4AE62 458 aa11.06□□□□□ -0.64
DDX39A-219ENST00000592927 LCN8Q6JVE9 175 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms