RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 BCAS2O75934 225 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 KRT75O95678 551 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 DDAH2O95865 285 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 PPIBP23284 216 aaKnown RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 SLC6A2P23975 617 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 PTGER1P34995 402 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 PSME3P61289 254 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 MRPS35P82673 323 aaKnown RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 MXRA7P84157 204 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 PRR5P85299 388 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SLC25A3Q00325 362 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 CAPRIN1Q14444 709 aaKnown RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 TRMT12Q53H54 448 aaKnown RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 C6orf163Q5TEZ5 329 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SAXO2Q658L1 398 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 NANOGP8Q6NSW7 305 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 JMJD6Q6NYC1 403 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 PPP1R32Q7Z5V6 425 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 LURAP1LQ8IV03 231 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 NFAM1Q8NET5 270 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 FDCSPQ8NFU4 85 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SSC4DQ8WTU2 575 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 NEURL3Q96EH8 262 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SENP5Q96HI0 755 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 ART5Q96L15 291 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SH3GL1Q99961 368 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 CPPED1Q9BRF8 314 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 SLC39A3Q9BRY0 314 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 BTBD10Q9BSF8 475 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 ZNF700Q9H0M5 742 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 NANOGQ9H9S0 305 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.41■□□□□ 0.06
GCDH-213ENST00000590627 PLEKHB1Q9UF11 243 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.41■□□□□ 0.06
GCDH-213ENST00000590627 AP3M1Q9Y2T2 418 aa15.41■□□□□ 0.06
GCDH-213ENST00000590627 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 RNF103-CHMP3A0A140T963 221 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 CLIC1O00299 241 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 SOCS6O14544 535 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 CBX7O95931 251 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 IGKV3-11P04433 115 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 SOAT1P35610 550 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 GPR143P51810 404 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 NCALDP61601 193 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 ZNF267Q14586 743 aaPredicted RBP15.4■□□□□ 0.06
GCDH-213ENST00000590627 INPP5JQ15735 1006 aaPredicted RBP15.4■□□□□ 0.06
GCDH-213ENST00000590627 SPDYE7PQ495Y7 208 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 DNAL1Q4LDG9 190 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 KIRREL2Q6UWL6 708 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 SLC2A12Q8TD20 617 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 GIMAP5Q96F15 307 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 MS4A4EQ96PG1 132 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 LPAR4Q99677 370 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 MESP1Q9BRJ9 268 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 NUDT9Q9BW91 350 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 LRMDAQ9H2I8 198 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 ZCCHC3Q9NUD5 404 aaKnown RBP15.4■□□□□ 0.06
GCDH-213ENST00000590627 DDX18Q9NVP1 670 aaKnown RBP15.4■□□□□ 0.06
GCDH-213ENST00000590627 GPATCH2Q9NW75 528 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 GPR83Q9NYM4 423 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 ABCD2Q9UBJ2 740 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 CORO2BQ9UQ03 480 aa15.4■□□□□ 0.06
GCDH-213ENST00000590627 NUP214P35658 2090 aaPredicted RBP15.4■□□□□ 0.06
GCDH-213ENST00000590627 CCDC88CQ9P219 2028 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 IGHV1-45A0A0A0MS14 117 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 A8MUA0 341 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 HRKO00198 91 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 GYG2O15488 501 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 COQ9O75208 318 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 CLPSP04118 112 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 COX6A1P12074 109 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 GPX2P18283 190 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 CHI3L1P36222 383 aaPredicted RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 MVDP53602 400 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 TXNL4AP83876 142 aaKnown RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 DUSP8Q13202 625 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 PCOLCEQ15113 449 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 EXOSC6Q5RKV6 272 aaKnown RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 ZCCHC12Q6PEW1 402 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 PAPD4Q6PIY7 484 aaKnown RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 ASRGL1Q7L266 308 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 C6orf120Q7Z4R8 191 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 RAB43Q86YS6 212 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 SLC15A3Q8IY34 581 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 DEFB107AQ8IZN7 70 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 CLEC4FQ8N1N0 589 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 ZNF615Q8N8J6 731 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 Q8NA96 180 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 NUP43Q8NFH3 380 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 OR11G2Q8NGC1 345 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 OR52N2Q8NGI0 321 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 OR1N1Q8NGS0 311 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 OR5AK3PQ8NH89 298 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 MIPOL1Q8TD10 442 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 ZNF721Q8TF20 911 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 HOXB13Q92826 284 aaPredicted RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 PNPLA2Q96AD5 504 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 TMEM125Q96AQ2 219 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 C8orf44Q96CB5 159 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 AURKBQ96GD4 344 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms