RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 GIMAP4Q9NUV9 329 aa16.72■□□□□ 0.27
DDX39A-212ENST00000590260 PLEKHB1Q9UF11 243 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-212ENST00000590260 C19orf53Q9UNZ5 99 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-212ENST00000590260 CFL2Q9Y281 166 aa16.72■□□□□ 0.27
DDX39A-212ENST00000590260 TMED5Q9Y3A6 229 aa16.72■□□□□ 0.27
DDX39A-212ENST00000590260 A0A087WV62 115 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 ANKRD33BA6NCL7 494 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 B4DXG7 233 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 CCL21O00585 134 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 CDC40O60508 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 UGT2B11O75310 529 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 MYZAPP0CAP1 466 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 GP1BBP13224 206 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 EFNA1P20827 205 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 ENDOUP21128 410 aaKnown RBP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 SLC1A6P48664 564 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 BST1Q10588 318 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 PTGR1Q14914 329 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 C3P1Q6ZMU1 363 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 WDR53Q7Z5U6 358 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 OR2L13Q8N349 312 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 LIX1Q8N485 282 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 DIO2Q92813 273 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 ELP4Q96EB1 424 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 PPP3R2Q96LZ3 170 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 RYDENQ9NUL5 291 aaKnown RBP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 PRODH2Q9UF12 536 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 RAP2CQ9Y3L5 183 aa16.71■□□□□ 0.27
DDX39A-212ENST00000590260 NCOA6Q14686 2063 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-212ENST00000590260 ICE1Q9Y2F5 2266 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 PDPK1O15530 556 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 TSPAN2O60636 221 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 ERN1O75460 977 aaKnown RBP16.7■□□□□ 0.26
DDX39A-212ENST00000590260 NAGAP17050 411 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 COL8A1P27658 744 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 CDK9P50750 372 aaKnown RBP16.7■□□□□ 0.26
DDX39A-212ENST00000590260 RBPJQ06330 500 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 CDSNQ15517 529 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 PDCD2Q16342 344 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-212ENST00000590260 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.7■□□□□ 0.267e-7■□□□□ 8.4
DDX39A-212ENST00000590260 RGS9BPQ6ZS82 235 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 SLC22A16Q86VW1 577 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 SLC34A3Q8N130 599 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 FAM109AQ8N4B1 249 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 PPP1R14CQ8TAE6 165 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 FAM57AQ8TBR7 257 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 RNF138Q8WVD3 245 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 ITLN2Q8WWU7 325 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-212ENST00000590260 TMBIM1Q969X1 311 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 MAGED4Q96JG8 741 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 PPP1R36Q96LQ0 422 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 RILPQ96NA2 401 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 DMRTA2Q96SC8 542 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 SECISBP2Q96T21 854 aaKnown RBP16.7■□□□□ 0.26
DDX39A-212ENST00000590260 ZFP64Q9NPA5 681 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 TNFRSF10DQ9UBN6 386 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 ATP6V1HQ9UI12 483 aa16.7■□□□□ 0.26
DDX39A-212ENST00000590260 GTF3C1Q12789 2109 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 A0A1B0GVC2 190 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 C17orf51A8MQB3 221 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 ACOX3O15254 700 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 BCAS2O75934 225 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-212ENST00000590260 ABOP16442 354 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 NTSP30990 170 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 PTGS2P35354 604 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 MAP3K8P41279 467 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 SLC18A1P54219 525 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 NRG3P56975 720 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 DCAF7P61962 342 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 KCNJ2P63252 427 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 PLCXD2Q0VAA5 305 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 IL23RQ5VWK5 629 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 TMEM81Q6P7N7 255 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 TRILQ7L0X0 811 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 CD163Q86VB7 1156 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 RIMKLAQ8IXN7 391 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 MARVELD2Q8N4S9 558 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 KRTCAP2Q8N6L1 136 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 OR7A2PQ8NGA2 310 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 PPCDCQ96CD2 204 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 GIMAP5Q96F15 307 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 SLC35A4Q96G79 324 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 DOHHQ9BU89 302 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 UBQLN3Q9H347 655 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 GALNT9Q9HCQ5 603 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 SIRT3Q9NTG7 399 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-212ENST00000590260 SPRR3Q9UBC9 169 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-212ENST00000590260 MEMO1Q9Y316 297 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 NINQ8N4C6 2090 aa16.69■□□□□ 0.26
DDX39A-212ENST00000590260 ZNF407Q9C0G0 2248 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 C2orf72A6NCS6 295 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 CAPN14A8MX76 684 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 ACOT7O00154 380 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 TP53I11O14683 189 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 SNNO75324 88 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms