RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CT83Q5H943 113 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 UBAP2Q5T6F2 1119 aaKnown RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 LIPJQ5W064 366 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 H3F3CQ6NXT2 135 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 CLEC18BQ6UXF7 455 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 C16orf47Q6ZP98 133 aaPredicted RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 GPR180Q86V85 440 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 CENPLQ8N0S6 344 aaPredicted RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 CPSF7Q8N684 471 aaKnown RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 CLEC18CQ8NCF0 446 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 OR5L2Q8NGL0 311 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 RHEBL1Q8TAI7 183 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 ELP5Q8TE02 316 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 ZNF473Q8WTR7 871 aaKnown RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 PPWD1Q96BP3 646 aaKnown RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 RAX2Q96IS3 184 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 QRFPRQ96P65 431 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 GAL3ST4Q96RP7 486 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 NPAS2Q99743 824 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 SLX1AQ9BQ83 275 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 MS4A8Q9BY19 250 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 ELOVL6Q9H5J4 265 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 RPF2Q9H7B2 306 aaKnown RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 LYRM4Q9HD34 91 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 SEMA4BQ9NPR2 832 aaPredicted RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 PFDN4Q9NQP4 134 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 XPR1Q9UBH6 696 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 PHF11Q9UIL8 331 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 KLF13Q9Y2Y9 288 aaPredicted RBP7.63□□□□□ -1.19
DNMT1-219ENST00000589349 RNF11Q9Y3C5 154 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 NUP210LQ5VU65 1888 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 BSNQ9UPA5 3926 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 SVILO95425 2214 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 SHANK1Q9Y566 2161 aa7.63□□□□□ -1.19
DNMT1-219ENST00000589349 HECTD1Q9ULT8 2610 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 SMIM23A6NLE4 172 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 FAM166BA8MTA8 275 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 GOLGA8RI6L899 631 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ASNA1O43681 348 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 PRKRAO75569 313 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CRCPO75575 148 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ESRRBO95718 433 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CLDN1O95832 211 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ALDOAP04075 364 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 KLK1P06870 262 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 SNRPAP09012 282 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 EPORP19235 508 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CNTFP26441 200 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 DEKP35659 375 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 HSF1Q00613 529 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 PLIN5Q00G26 463 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ZNF267Q14586 743 aaPredicted RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 KRTCAP3Q53RY4 240 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 DEPDC1Q5TB30 811 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 C18orf63Q68DL7 685 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 C3P1Q6ZMU1 363 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ZNF793Q6ZN11 406 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CMTM4Q8IZR5 234 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 GHDCQ8N2G8 530 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 MDS2Q8NDY4 140 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 NFAM1Q8NET5 270 aaPredicted RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 OR5M3Q8NGP4 307 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 OR14A16Q8NHC5 309 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 UBTD2Q8WUN7 234 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 SLC44A1Q8WWI5 657 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 WDR34Q96EX3 536 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 JSRP1Q96MG2 331 aaPredicted RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 BARD1Q99728 777 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 DEFB127Q9H1M4 99 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 DMRT3Q9NQL9 472 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 MS4A12Q9NXJ0 267 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 ALKBH4Q9NXW9 302 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 AHSPQ9NZD4 102 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 TBK1Q9UHD2 729 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 TINAGQ9UJW2 476 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 TMCO1Q9UM00 188 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 SLC12A4Q9UP95 1085 aa7.62□□□□□ -1.19
DNMT1-219ENST00000589349 YARS2Q9Y2Z4 477 aaKnown RBP7.62□□□□□ -1.19
DNMT1-219ENST00000589349 IGKV3D-11A0A0A0MRZ8 115 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 UBE2QL1A1L167 161 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 SYNDIG1LA6NDD5 238 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 CYR61O00622 381 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 HS6ST1O60243 411 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 FGF17O60258 216 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 NME2P1O60361 137 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 NEURL1O76050 574 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 SUPT7LO94864 414 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 C1QAP02745 245 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 P04436 131 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 LPLP06858 475 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 TPOP07202 933 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 STSP08842 583 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 FAM58BPP0C7Q3 252 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 NR2F6P10588 404 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 MTHFD2P13995 350 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 NT5EP21589 574 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 PIK3R1P27986 724 aa7.61□□□□□ -1.19
DNMT1-219ENST00000589349 SOX3P41225 446 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms