RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZNF511Q8NB15 262 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 HIPK4Q8NE63 616 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 CLHC1Q8NHS4 586 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 ZFP28Q8NHY6 868 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 CDC26Q8NHZ8 85 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 NR4A3Q92570 626 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 RELTQ969Z4 430 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 COQ8BQ96D53 544 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 FAM120BQ96EK7 910 aaKnown RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 REXO5Q96IC2 774 aaKnown RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 C10orf90Q96M02 699 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 RNF145Q96MT1 663 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 KCNC2Q96PR1 638 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 PCNX1Q96RV3 2341 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 YIPF2Q9BWQ6 316 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 UGT2B28Q9BY64 529 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 HES7Q9BYE0 225 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 KLHL4Q9C0H6 718 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 PAIP1Q9H074 479 aaKnown RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.31□□□□□ -1.24
VMP1-204ENST00000587259 SLC26A1Q9H2B4 701 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 GORASP2Q9H8Y8 452 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 WDR54Q9H977 334 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 CCM2LQ9NUG4 571 aaPredicted RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 CMTM6Q9NX76 183 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 EHD3Q9NZN3 535 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 NKX1-2Q9UD57 310 aaPredicted RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 PACSIN3Q9UKS6 424 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 CNOT11Q9UKZ1 510 aaKnown RBP7.31□□□□□ -1.24
VMP1-204ENST00000587259 SH2B3Q9UQQ2 575 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 LRCH1Q9Y2L9 728 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 KLK4Q9Y5K2 254 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 ITPR3Q14573 2671 aa7.31□□□□□ -1.24
VMP1-204ENST00000587259 MTORP42345 2549 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ZFHX3Q15911 3703 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 NSG1A0A0A6YYJ2 146 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 IGHV3-20A0A0C4DH32 117 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ELOVL7A1L3X0 281 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 HYKKA2RU49 373 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 H3BNX3 289 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 H7BY64 318 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ETHE1O95571 254 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 KRT75O95678 551 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 HPP00738 406 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ALBP02768 609 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 DRD2P14416 443 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 COX6B1P14854 86 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 CD1EP15812 388 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 GGT1P19440 569 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 DDCP20711 480 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ATP6V1C1P21283 382 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 TACR1P25103 407 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 SOX11P35716 441 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 TNFSF10P50591 281 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ANXA11P50995 505 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 ARSFP54793 590 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 MTPNP58546 118 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 RAE1P78406 368 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 TXNL4AP83876 142 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 MS4A2Q01362 244 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 C2orf80Q0P641 193 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 FADDQ13158 208 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 GRM7Q14831 915 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 C3AR1Q16581 482 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 HKDC1Q2TB90 917 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ADPRMQ3LIE5 342 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 FAM98BQ52LJ0 330 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 RABL3Q5HYI8 236 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 OGFRL1Q5TC84 451 aaPredicted RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 OR4F3Q6IEY1 312 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 FAM71E1Q6IPT2 247 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ZNF425Q6IV72 752 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 C3P1Q6ZMU1 363 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 GDF7Q7Z4P5 450 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 IFNEQ86WN2 208 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 KBTBD2Q8IY47 623 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 SAMD14Q8IZD0 417 aaPredicted RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 ZCCHC7Q8N3Z6 543 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 PACRGLQ8N7B6 248 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 TTC29Q8NA56 475 aaPredicted RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 MFSD9Q8NBP5 474 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 GOT1L1Q8NHS2 421 aaPredicted RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.3□□□□□ -1.24
VMP1-204ENST00000587259 C16orf78Q8WTQ4 265 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 GAL3ST3Q96A11 431 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 PPWD1Q96BP3 646 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 MIEF2Q96C03 454 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 PRAP1Q96NZ9 151 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 BTBD9Q96Q07 612 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 CPPED1Q9BRF8 314 aaPredicted RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 DPH7Q9BTV6 452 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 TBCDQ9BTW9 1192 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 CHRNA10Q9GZZ6 450 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 PCDHAC1Q9H158 963 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 OR51B5Q9H339 312 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 MAGIXQ9H6Y5 334 aa7.3□□□□□ -1.24
VMP1-204ENST00000587259 KAT8Q9H7Z6 458 aaKnown RBP7.3□□□□□ -1.24
VMP1-204ENST00000587259 DDX31Q9H8H2 851 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms