RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TMEM19Q96HH6 336 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SLC41A2Q96JW4 573 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 ZNF578Q96N58 590 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 YTHDF1Q9BYJ9 559 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 FANCEQ9HB96 536 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 DDX18Q9NVP1 670 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 C3orf18Q9UK00 162 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 MRPS2Q9Y399 296 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 GPC6Q9Y625 555 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CASC3O15234 703 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 COQ9O75208 318 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 RDH16O75452 317 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 DNAJB5O75953 348 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 TNFAIP8O95379 198 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 IFNW1P05000 195 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 THRBP10828 461 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 NELFEP18615 380 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 MYF6P23409 242 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 MC3RP41968 323 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 KCNJ5P48544 419 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 MAN2A2P49641 1150 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 HMGA2P52926 109 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CRYBA2P53672 197 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 HSD17B7P56937 341 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 IGLV3-21P80748 117 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 VLDLRP98155 873 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 PPP2R2BQ00005 443 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 DUSP2Q05923 314 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 MAP4K2Q12851 820 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 SERTAD2Q14140 314 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 LASP1Q14847 261 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 GPR19Q15760 415 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 DEFB110Q30KQ9 67 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF750Q32MQ0 723 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 IQCCQ4KMZ1 466 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF628Q5EBL2 1059 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 OTUD3Q5T2D3 398 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 NKAIN2Q5VXU1 208 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 KRT80Q6KB66 452 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 UGT2A3Q6UWM9 527 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CYP4Z1Q86W10 505 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CARM1Q86X55 608 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CHERPQ8IWX8 916 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 GPR135Q8IZ08 494 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 CDRT4Q8N9R6 151 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF555Q8NEP9 628 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 OR9A4Q8NGU2 314 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 RAB8BQ92930 207 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 COL26A1Q96A83 441 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ANKRD9Q96BM1 317 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 RBM18Q96H35 190 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 MAGED4Q96JG8 741 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF354BQ96LW1 612 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 OR7D2Q96RA2 312 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF300Q96RE9 604 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 CSF3RQ99062 836 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 STACQ99469 402 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 TREX2Q9BQ50 279 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 ZNF768Q9H5H4 540 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 EVA1AQ9H8M9 152 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 MTHFD2LQ9H903 347 aaPredicted RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 CACYBPQ9HB71 228 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 PNPLA3Q9NST1 481 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 STARD5Q9NSY2 213 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 SEC14L3Q9UDX4 400 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 SAMHD1Q9Y3Z3 626 aaKnown RBP9.72□□□□□ -0.85
LIG3-203ENST00000585370 ENPP4Q9Y6X5 453 aa9.72□□□□□ -0.85
LIG3-203ENST00000585370 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 A0A0A6YYC8 382 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 EME2A4GXA9 379 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 ZNF860A6NHJ4 632 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 I3L1I5 382 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 hCG_2039718K7EN88 272 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 SYT5O00445 386 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 DLGAP1O14490 977 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 HCRTR1O43613 425 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 FGF17O60258 216 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 BRINP1O60477 761 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 DNAJB6O75190 326 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 UGT2B11O75310 529 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 OR2B3O76000 313 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 FESP07332 822 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 GUSBP08236 651 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ALOX5P09917 674 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ANKRD34CP0C6C1 535 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 MYF5P13349 255 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ANXA8P13928 327 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 CD247P20963 164 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 NT5EP21589 574 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 RPS26P62854 115 aaKnown RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 OLR1P78380 273 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ADARB1P78563 741 aaKnown RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 E2F1Q01094 437 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 IL18R1Q13478 541 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 SYPL1Q16563 259 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms