RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 UBDO15205 165 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 EMC8O43402 210 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ZNF354AO60765 605 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PPM1BO75688 479 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PSMG1O95456 288 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 KRT20P35900 424 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CDK9P50750 372 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 STX1BP61266 288 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MRPS22P82650 360 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NNATQ16517 81 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NTRK2Q16620 822 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PDCD4Q53EL6 469 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 TBCELQ5QJ74 424 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ANXA8L1Q5VT79 327 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 TMEM64Q6YI46 380 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 GK5Q6ZS86 529 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OR56A1Q8NGH5 318 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PSMA8Q8TAA3 256 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SFXN5Q8TD22 340 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 GRHL3Q8TE85 626 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NR4A3Q92570 626 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MAGED4Q96JG8 741 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OR52B2Q96RD2 323 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SECISBP2Q96T21 854 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 BARD1Q99728 777 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CCDC28BQ9BUN5 200 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CLMPQ9H6B4 373 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ZIM2Q9NZV7 527 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CNIH4Q9P003 139 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NTMQ9P121 344 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OR10H1Q9Y4A9 318 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 GPR45Q9Y5Y3 372 aa11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SPENQ96T58 3664 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 USP9XQ93008 2570 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CFLARO15519 480 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PEX1O43933 1283 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 EDF1O60869 148 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ABCB7O75027 752 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 C6orf47O95873 294 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 KRT16P08779 473 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 EDN3P14138 238 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ZNF24P17028 368 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 EFNA1P20827 205 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ABCD3P28288 659 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 S100A3P33764 101 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MEOX1P50221 254 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 AQP5P55064 265 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 IRX1P78414 480 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 LRRC74AQ0VAA2 488 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ELOAQ14241 798 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SPDYE7PQ495Y7 208 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SLC22A10Q63ZE4 541 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OR4F3Q6IEY1 312 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 BHLHB9Q6PI77 547 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MDGA2Q7Z553 956 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SLC44A2Q8IWA5 706 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 FBXW8Q8N3Y1 598 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 CDRT4Q8N9R6 151 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SIMC1Q8NDZ2 872 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NUP43Q8NFH3 380 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OR10G3Q8NGC4 313 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 PAQR8Q8TEZ7 354 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 OMA1Q96E52 524 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 FRMD6Q96NE9 622 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SLX1AQ9BQ83 275 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 FAM173AQ9BQD7 235 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 LMF2Q9BU23 707 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ANKRA2Q9H9E1 313 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 Q9N2J8 555 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 MRTO4Q9UKD2 239 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 SNX8Q9Y5X2 465 aa11.71□□□□□ -0.53
CDK5RAP3-203ENST00000577442 GTF3C1Q12789 2109 aa11.71□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PRSS51A0A1B0GVH4 220 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ACOT7O00154 380 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CT45A8P0DMV1 189 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CT45A9P0DMV2 189 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CCL3P10147 92 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 TROVE2P10155 538 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CNR1P21554 472 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 IL12BP29460 328 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 SOAT1P35610 550 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PRIM2P49643 509 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 IDH3AP50213 366 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PSMD4P55036 377 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CORO7P57737 925 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PMP22Q01453 160 aa11.7□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ALDH6A1Q02252 535 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms