RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 BCL2L14Q9BZR8 327 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 EMC3Q9P0I2 261 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 HYKKA2RU49 373 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 C1QBP02746 253 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACPPP15309 386 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 RORAP35398 523 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 TOR1AIP1Q5JTV8 583 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 MANEALQ5VSG8 457 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 KIAA0319Q5VV43 1072 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC8B1Q6J4K2 584 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 NRMQ8IXM6 262 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 JAGN1Q8N5M9 183 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 KCT2Q8NC54 265 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CYB5D2Q8WUJ1 264 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SGTBQ96EQ0 304 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SAP130Q9H0E3 1048 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM39AQ9NV64 488 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 A0A1W2PRU2 124 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 M0QZQ0 153 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SPDEFO95238 335 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACP5P13686 325 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 GPX2P18283 190 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC11A1P49279 550 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 HBA1P69905 142 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 PSPHP78330 225 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 NKX3-2P78367 333 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLAMF1Q13291 335 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 RPL13AP3Q6NVV1 102 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM179BQ7Z7N9 219 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 LRRTM4Q86VH4 590 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMPRSS12Q86WS5 348 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 METTL8Q9H825 291 aaKnown RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 PADI2Q9Y2J8 665 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 PSMD9O00233 223 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ARPC1BO15143 372 aaKnown RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CTSEP14091 401 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 MMP12P39900 470 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC5A12Q1EHB4 618 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZFAND1Q8TCF1 268 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 BRI3BPQ8WY22 251 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CSF3RQ99062 836 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLIRPQ9GZT3 109 aaKnown RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 RREB1Q92766 1687 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SCAMP1O15126 338 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 GMFGO60234 142 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 OAZ2O95190 189 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 AHCYP23526 432 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 MASP1P48740 699 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SPINT3P49223 89 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SUOXP51687 545 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 RPS25P62851 125 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ASAH1Q13510 395 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 NUP43Q8NFH3 380 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 THEM6Q8WUY1 208 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF285Q96NJ3 590 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 TRPM3Q9HCF6 1732 aaPredicted RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 DNAJC25-GNG10A0A024R161 153 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 CSO75390 466 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC22A5O76082 557 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 UCHL1P09936 223 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACP2P11117 423 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 CLCN7P51798 805 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 RAB5BP61020 215 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 PXDC1Q5TGL8 231 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ALKAL1Q6UXT8 129 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 CBARPQ8N350 705 aaPredicted RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 TRAM1L1Q8N609 369 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 PMEPA1Q969W9 287 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 MRTO4Q9UKD2 239 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 GABRPO00591 440 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 NCR1O76036 304 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SPNP16150 400 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF823P16415 610 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 GABRA5P31644 462 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 FKBP1BP68106 108 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 LMAN2Q12907 356 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 ELOAQ14241 798 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 GK2Q14410 553 aaPredicted RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 MARCH8Q5T0T0 291 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms