RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NODALQ96S42 347 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 DUSP26Q9BV47 211 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 DPY30Q9C005 99 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 TSPAN10Q9H1Z9 355 aaPredicted RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 ACSS1Q9NUB1 689 aaPredicted RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 GIMAP4Q9NUV9 329 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 HPF1Q9NWY4 346 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 ABI3Q9P2A4 366 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 GPR55Q9Y2T6 319 aaPredicted RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 NPFFR2Q9Y5X5 522 aa6.43□□□□□ -1.38
SMG6-209ENST00000571442 COPG1Q9Y678 874 aaKnown RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 CHCHD2Q9Y6H1 151 aaPredicted RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 USP9XQ93008 2570 aaPredicted RBP6.43□□□□□ -1.38
SMG6-209ENST00000571442 ZNF407Q9C0G0 2248 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 USP9YO00507 2555 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 A0A1W2PRB8 838 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FRG2CA6NGY1 282 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 LRRC3CA6NJW4 275 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TRPC5OSA6NMA1 111 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 CYSRT1A8MQ03 144 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TO15178 435 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ATP8B1O43520 1251 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PEX1O43933 1283 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TSPAN2O60636 221 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 UGT2B11O75310 529 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 VPS4BO75351 444 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ERN1O75460 977 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 RASAL1O95294 804 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 IGKV1D-16P01601 117 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ABCB1P08183 1280 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 CD46P15529 392 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PRPS1L1P21108 318 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 DRD5P21918 477 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 GNLYP22749 145 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 CDKN2CP42773 168 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PPICP45877 212 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PRKAG1P54619 331 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 GYS2P54840 703 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 MANFP55145 182 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 CASP9P55211 416 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 HSF1Q00613 529 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FOXO1Q12778 655 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ZNF155Q12901 538 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 MAD2L1Q13257 205 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 GAB1Q13480 694 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 MLC1Q15049 377 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 DUSP5Q16690 384 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PGS1Q32NB8 556 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FAM174BQ3ZCQ3 159 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PDCD4Q53EL6 469 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 C6orf163Q5TEZ5 329 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FNDC7Q5VTL7 733 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PAOXQ6QHF9 649 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 RTL4Q6ZR62 310 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OLIG3Q7RTU3 272 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 R3HCC1LQ7Z5L2 792 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 SPATA19Q7Z5L4 167 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FGD2Q7Z6J4 655 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ZAR1Q86SH2 424 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 GALNT10Q86SR1 603 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 LSRQ86X29 649 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 FUNDC1Q8IVP5 155 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SIAH3Q8IW03 269 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLC44A2Q8IWA5 706 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 CHERPQ8IWX8 916 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 LRRC34Q8IZ02 419 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SAMD14Q8IZD0 417 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 C7orf57Q8NEG2 295 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 C17orf47Q8NEP4 570 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 NUP43Q8NFH3 380 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OR2M7Q8NG81 312 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OR8J2Q8NGG1 315 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OR5AK3PQ8NH89 298 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PSMA8Q8TAA3 256 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLC22A8Q8TCC7 542 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SPPL2AQ8TCT8 520 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PAQR8Q8TEZ7 354 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FAR1Q8WVX9 515 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OR5P2Q8WZ92 322 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PIK3R3Q92569 461 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TMBIM1Q969X1 311 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TESCQ96BS2 214 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 OMA1Q96E52 524 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ZBED6CLQ96FA7 236 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 LCORQ96JN0 433 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 C5orf34Q96MH7 638 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLX1AQ9BQ83 275 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 INPP5KQ9BT40 448 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 LMF2Q9BU23 707 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 RTN4RQ9BZR6 473 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 BHLHE41Q9C0J9 482 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 ACBD3Q9H3P7 528 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 ZNF385DQ9H6B1 395 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 NPHS2Q9NP85 383 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 MED4Q9NPJ6 270 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLC52A3Q9NQ40 469 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms