RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 HMGCS1Q01581 520 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 SLC18A2Q05940 514 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PLCXD2Q0VAA5 305 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 SF3B4Q15427 424 aaKnown RBP eCLIP15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 LTB4RQ15722 352 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 VASNQ6EMK4 673 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PM20D2Q8IYS1 436 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 SIMC1Q8NDZ2 872 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OMA1Q96E52 524 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ZNF764Q96H86 408 aaPredicted RBP15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 JSRP1Q96MG2 331 aaPredicted RBP15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 VSTM2LQ96N03 204 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 KCNA7Q96RP8 456 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 EXO5Q9H790 373 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MCCC2Q9HCC0 563 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 GIMAP4Q9NUV9 329 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MKS1Q9NXB0 559 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TNFRSF10DQ9UBN6 386 aa15.62■□□□□ 0.09
MAP1LC3B-208ENST00000570189 A0A087WV62 115 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 NKX2-6A6NCS4 301 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MYO1GB0I1T2 1018 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 SNPHO15079 494 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 EPPINO95925 133 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ANXA4P09525 319 aaPredicted RBP15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CT45A8P0DMV1 189 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CT45A9P0DMV2 189 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CEACAM8P31997 349 aaPredicted RBP15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MPIP34949 423 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ADH7P40394 386 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MASP1P48740 699 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 NAGLUP54802 743 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FOXA1P55317 472 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MRPS35P82673 323 aaKnown RBP15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CT45A2Q5DJT8 189 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FAM71E1Q6IPT2 247 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 IKBIPQ70UQ0 350 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CCDC116Q8IYX3 515 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PRR22Q8IZ63 422 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CCNYL1Q8N7R7 359 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 UBLCP1Q8WVY7 318 aaPredicted RBP15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TIMP4Q99727 224 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OSBPL11Q9BXB4 747 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 UCK2Q9BZX2 261 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 METTL7AQ9H8H3 244 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MYNNQ9NPC7 610 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 KCNN3Q9UGI6 736 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MID2Q9UJV3 735 aa15.61■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FAM90A27PA6NNH2 459 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 HSPB2A8KAH6 182 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ICOSLGO75144 302 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 UGT2B11O75310 529 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 UROSP10746 265 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TIMP3P35625 211 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PEX19P40855 299 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 HSPB2Q16082 182 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ERCC6LQ2NKX8 1250 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ACSF3Q4G176 576 aaPredicted RBP15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 LIPMQ5VYY2 423 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 SEM1Q6ZVN7 128 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 LACC1Q8IV20 430 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FAM9CQ8IZT9 166 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CLYBLQ8N0X4 340 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OR1J4Q8NGS1 313 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OR9A2Q8NGT5 310 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 EXOSC8Q96B26 276 aaKnown RBP15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TMCO6Q96DC7 493 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 GNRHR2Q96P88 292 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 NODALQ96S42 347 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TRMOQ9BU70 441 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TAS2R9Q9NYW1 312 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 EXO1Q9UQ84 846 aaKnown RBP15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 MRPS18CQ9Y3D5 142 aaKnown RBP15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CCL27Q9Y4X3 112 aa15.6■□□□□ 0.09
MAP1LC3B-208ENST00000570189 POLQO75417 2590 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 C15orf38-AP3S2A0A0A6YYH1 394 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PLOD2O00469 737 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 COPEO14579 308 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TSPAN2O60636 221 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CBR3O75828 277 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PSMG1O95456 288 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ACTL6AO96019 429 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 CPA3P15088 417 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TRPC1P48995 793 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 PNLIPRP2P54317 469 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 TLE4Q04727 773 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 KIAA0040Q15053 153 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 NNATQ16517 81 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FBXL19-AS1Q494R0 122 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FAM180BQ6P0A1 224 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OR7G2Q8NG99 324 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OR10Q1Q8NGQ4 319 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 DTNBP1Q96EV8 351 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FCRL1Q96LA6 429 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 COL21A1Q96P44 957 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 OR2B2Q9GZK3 357 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 RRAGDQ9NQL2 400 aaPredicted RBP15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 ANKHD1Q8IWZ3 2542 aaKnown RBP15.59■□□□□ 0.09
MAP1LC3B-208ENST00000570189 KIAA1549Q9HCM3 1950 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms