RNA–Protein interactions for RNA: ENST00000569248.5

STUB1-211, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 5

Gene STUB1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-211	ENST00000569248	SGK494	L7N484	410 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	STK25	O00506	426 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	NOL3	O60936	208 aa	Known RBP	27.56	■■■□□ 2
STUB1-211	ENST00000569248	KRT20	P35900	424 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	MAPK10	P53779	464 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	SKP1	P63208	163 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	ID2	Q02363	134 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	PIN1	Q13526	163 aa	Predicted RBP	27.56	■■■□□ 2
STUB1-211	ENST00000569248	PRTG	Q2VWP7	1150 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	DEFB110	Q30KQ9	67 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	TMEM52	Q8NDY8	209 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	OR6T1	Q8NGN1	323 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	C1orf216	Q8TAB5	229 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	ERVK-18	Q9QC07	812 aa		27.56	■■■□□ 2
STUB1-211	ENST00000569248	PLOD3	O60568	738 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	TMBIM6	P55061	237 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	SEC23B	Q15437	767 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	SMN1	Q16637	294 aa	Known RBP	27.55	■■■□□ 2
STUB1-211	ENST00000569248	FHL5	Q5TD97	284 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	MLIP	Q5VWP3	458 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	NIPAL1	Q6NVV3	410 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	OGFOD3	Q6PK18	319 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	SLC9A6	Q92581	669 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	PRRC1	Q96M27	445 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	MAP3K3	Q99759	626 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	UCK2	Q9BZX2	261 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	PLCXD1	Q9NUJ7	323 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	ABCA7	Q8IZY2	2146 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	OR10H3	O60404	316 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	NT5E	P21589	574 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	PRKAR1B	P31321	381 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	CRISP1	P54107	249 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	PTGES3	Q15185	160 aa	Known RBP	27.55	■■■□□ 2
STUB1-211	ENST00000569248	NDUFA9	Q16795	377 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	ARHGAP11B	Q3KRB8	267 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	TRMT12	Q53H54	448 aa	Known RBP	27.55	■■■□□ 2
STUB1-211	ENST00000569248	ZNF675	Q8TD23	568 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	CDS1	Q92903	461 aa		27.55	■■■□□ 2
STUB1-211	ENST00000569248	MTHFD2L	Q9H903	347 aa	Predicted RBP	27.55	■■■□□ 2
STUB1-211	ENST00000569248	SH3PXD2B	A1X283	911 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	RGS10	O43665	173 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	SOX18	P35713	384 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	IDH2	P48735	452 aa	Known RBP	27.54	■■■□□ 2
STUB1-211	ENST00000569248	UGT2B15	P54855	530 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	EMX1	Q04741	257 aa	Predicted RBP	27.54	■■■□□ 2
STUB1-211	ENST00000569248	ZCCHC12	Q6PEW1	402 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	DHRS4L2	Q6PKH6	230 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	WDR53	Q7Z5U6	358 aa	Predicted RBP	27.54	■■■□□ 2
STUB1-211	ENST00000569248	SVOP	Q8N4V2	548 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	OR9A4	Q8NGU2	314 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	ARHGDIG	Q99819	225 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	DGCR6L	Q9BY27	220 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	QRSL1	Q9H0R6	528 aa	Known RBP	27.54	■■■□□ 2
STUB1-211	ENST00000569248	PIGU	Q9H490	435 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	CACYBP	Q9HB71	228 aa	Known RBP	27.54	■■■□□ 2
STUB1-211	ENST00000569248	IMPAD1	Q9NX62	359 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	KLHL28	Q9NXS3	571 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	IFT52	Q9Y366	437 aa		27.54	■■■□□ 2
STUB1-211	ENST00000569248	FAM227A	F5H4B4	570 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	RDH16	O75452	317 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	OSM	P13725	252 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	GSS	P48637	474 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	PDX1	P52945	283 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	CDC42	P60953	191 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	CWF19L1	Q69YN2	538 aa	Known RBP	27.53	■■■□□ 2
STUB1-211	ENST00000569248	HMGN2P46	Q86SG4	172 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	SLC7A13	Q8TCU3	470 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	SLC24A3	Q9HC58	644 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	FTSJ1	Q9UET6	329 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	THADA	Q6YHU6	1953 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	ZAR1L	A6NP61	321 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248		H3BMQ9	156 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	NME6	O75414	186 aa	Predicted RBP	27.53	■■■□□ 2
STUB1-211	ENST00000569248	CHM	P24386	653 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	DYNC1I2	Q13409	638 aa	Known RBP	27.53	■■■□□ 2
STUB1-211	ENST00000569248	PRICKLE4	Q2TBC4	344 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	PRSS48	Q7RTY5	328 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	OR52P1P	Q8NH57	321 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	ANKRD9	Q96BM1	317 aa	Predicted RBP	27.53	■■■□□ 2
STUB1-211	ENST00000569248	COG8	Q96MW5	612 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	LIN28A	Q9H9Z2	209 aa	Known RBP	27.53	■■■□□ 2
STUB1-211	ENST00000569248	PCDHGA10	Q9Y5H3	936 aa		27.53	■■■□□ 2
STUB1-211	ENST00000569248	ZNF99	A8MXY4	864 aa	Predicted RBP	27.52	■■■□□ 2
STUB1-211	ENST00000569248	CHST10	O43529	356 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	ACP2	P11117	423 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	CXCL12	P48061	93 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	ILK	Q13418	452 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	DUSP5	Q16690	384 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	DEFB133	Q30KQ1	61 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	FRRS1	Q6ZNA5	592 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	VRK2	Q86Y07	508 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	DNASE2B	Q8WZ79	361 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	ZG16B	Q96DA0	208 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	ZNF226	Q9NYT6	803 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	ZNF232	Q9UNY5	417 aa		27.52	■■■□□ 2
STUB1-211	ENST00000569248	MPZL2	O60487	215 aa		27.51	■■□□□ 1.99
STUB1-211	ENST00000569248	FCMR	O60667	390 aa		27.51	■■□□□ 1.99
STUB1-211	ENST00000569248	CTSB	P07858	339 aa		27.51	■■□□□ 1.99
STUB1-211	ENST00000569248	ALOX5	P09917	674 aa		27.51	■■□□□ 1.99
STUB1-211	ENST00000569248	MVK	Q03426	396 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms