RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PORP16435 677 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 IL12AP29459 219 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 GALNSP34059 522 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 POLR2JP52435 117 aaKnown RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 PLGLB1Q02325 96 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 RNFT1Q5M7Z0 435 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 HLA-DQA1Q5Y7H0 255 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 FAM71E1Q6IPT2 247 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SLC48A1Q6P1K1 146 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 YTHDF3Q7Z739 585 aaKnown RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 MMP21Q8N119 569 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 TESCQ96BS2 214 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SGCZQ96LD1 299 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 TEX37Q96LM6 180 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 ZBTB18Q99592 522 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 CXorf21Q9HAI6 301 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SLC52A3Q9NQ40 469 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SUCOQ9UBS9 1254 aaKnown RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 TAGLN3Q9UI15 199 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SPTAN1Q13813 2472 aaKnown RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 POLEQ07864 2286 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 OR6C76A6NM76 312 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CCL21O00585 134 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CDC40O60508 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF354AO60765 605 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 ATP5HO75947 161 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 P04436 131 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CD1EP15812 388 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CSNK2A2P19784 350 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CALB2P22676 271 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 SSTR4P31391 388 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 RPL3P39023 403 aaKnown RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 FEN1P39748 380 aaKnown RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 SLC37A1P57057 533 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 RCAN2Q14206 197 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 GK5Q6ZS86 529 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CCDC121Q6ZUS5 278 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 SIAH3Q8IW03 269 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 GHDCQ8N2G8 530 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 CLHC1Q8NHS4 586 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 RELTQ969Z4 430 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 MTERF3Q96E29 417 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 WWTR1Q9GZV5 400 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
COMMD4-225ENST00000569245 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
COMMD4-225ENST00000569245 HIVEP3Q5T1R4 2406 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SCAMP2O15127 329 aaKnown RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 HS6ST1O60243 411 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 TBX19O60806 448 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 ZG16O60844 167 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 KRT34O76011 436 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 IL6P05231 212 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 IL3P08700 152 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 ESRRAP11474 423 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 DRD2P14416 443 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 ABOP16442 354 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 CNR1P21554 472 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 PTGER1P34995 402 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 HPCAL1P37235 193 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 CA7P43166 264 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 PPIAP62937 165 aaKnown RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 HSF1Q00613 529 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 C2orf80Q0P641 193 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 STX5Q13190 355 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 PDE7AQ13946 482 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 HEPACAMQ14CZ8 416 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 MAMDC2Q7Z304 686 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 R3HCC1LQ7Z5L2 792 aaKnown RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 CAMKMTQ7Z624 323 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SNX32Q86XE0 403 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SPPL2CQ8IUH8 684 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 TAGAPQ8N103 731 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SLC15A4Q8N697 577 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 POU5F2Q8N7G0 328 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 ZFP62Q8NB50 900 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 GOLM1Q8NBJ4 401 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 FAM13CQ8NE31 585 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 OR5M3Q8NGP4 307 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 CDC26Q8NHZ8 85 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SPDL1Q96EA4 605 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF764Q96H86 408 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-225ENST00000569245 FAM173AQ9BQD7 235 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 OR10A5Q9H207 317 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 DEPPQ9NTK1 212 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 BCAP29Q9UHQ4 241 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms