RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 UBTD2Q8WUN7 234 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 LCORQ96JN0 433 aaPredicted RBP11.26□□□□□ -0.61
SNX29-207ENST00000568949 MTERF1Q99551 399 aaKnown RBP11.26□□□□□ -0.61
SNX29-207ENST00000568949 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 PSD3Q9NYI0 1048 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 OPTCQ9UBM4 332 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 DTX4Q9Y2E6 619 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 JRKLQ9Y4A0 524 aa11.26□□□□□ -0.61
SNX29-207ENST00000568949 A0A087X1B8 175 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 HS3ST1O14792 307 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 CPMP14384 443 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 EPB42P16452 691 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 CNTFP26441 200 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 XKP51811 444 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
SNX29-207ENST00000568949 SIRPAP78324 504 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 NNATQ16517 81 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 LIPJQ5W064 366 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 NUDT13Q86X67 352 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 GBP7Q8N8V2 638 aaPredicted RBP11.25□□□□□ -0.61
SNX29-207ENST00000568949 ZNF610Q8N9Z0 462 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 MAPK1IP1LQ8NDC0 245 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 STAG3L4Q8TBR4 150 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 REPS1Q96D71 796 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 TMCO6Q96DC7 493 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 UBXN10Q96LJ8 280 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 CAB39LQ9H9S4 337 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 YAE1D1Q9NRH1 226 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 NUDT4Q9NZJ9 180 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 FBXL2Q9UKC9 423 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
SNX29-207ENST00000568949 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
SNX29-207ENST00000568949 ANK3Q12955 4377 aaKnown RBP11.25□□□□□ -0.61
SNX29-207ENST00000568949 OR6C70A6NIJ9 312 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 H0YIV9 168 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 TO15178 435 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 PHGDHO43175 533 aaKnown RBP11.24□□□□□ -0.61
SNX29-207ENST00000568949 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
SNX29-207ENST00000568949 ZIC3O60481 467 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 TNFRSF21O75509 655 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 THBDP07204 575 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 PEPDP12955 493 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 PORP16435 677 aaPredicted RBP11.24□□□□□ -0.61
SNX29-207ENST00000568949 STMN1P16949 149 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 DRD5P21918 477 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 IDUAP35475 653 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 PPICP45877 212 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ARL4CP56559 192 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 B3GALT5-AS1P59052 145 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 RPS4XP62701 263 aaKnown RBP11.24□□□□□ -0.61
SNX29-207ENST00000568949 MAP4K2Q12851 820 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 CHRFAM7AQ494W8 412 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ANKRD34AQ69YU3 496 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 FIG4Q92562 907 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 EXT2Q93063 718 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 TRMT61AQ96FX7 289 aaKnown RBP11.24□□□□□ -0.61
SNX29-207ENST00000568949 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ITPAQ9BY32 194 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 KLHL4Q9C0H6 718 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ZNF639Q9UID6 485 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 ZNF175Q9Y473 711 aa11.24□□□□□ -0.61
SNX29-207ENST00000568949 OVOL3O00110 214 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 FOXE1O00358 373 aaPredicted RBP11.23□□□□□ -0.61
SNX29-207ENST00000568949 UGDHO60701 494 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 SEMA3DO95025 777 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 DPP4P27487 766 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 MGAT2Q10469 447 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
SNX29-207ENST00000568949 PRICKLE4Q2TBC4 344 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 ISCA2Q86U28 154 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 MYLK4Q86YV6 388 aaPredicted RBP11.23□□□□□ -0.61
SNX29-207ENST00000568949 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 FBXO36Q8NEA4 188 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 SLC35A4Q96G79 324 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 COL21A1Q96P44 957 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 ALG9Q9H6U8 611 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 EHD3Q9NZN3 535 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 PRODH2Q9UF12 536 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 BCAP29Q9UHQ4 241 aa11.23□□□□□ -0.61
SNX29-207ENST00000568949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNX29-207ENST00000568949 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 EFCAB8A8MWE9 144 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 SUPT3HB4E1H0 165 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 KERAO60938 352 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 SUPT3HO75486 399 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 PLAUP00749 431 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 GBAP04062 536 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 ATP1B1P05026 303 aa11.22□□□□□ -0.61
SNX29-207ENST00000568949 FAM157CP0CG43 387 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms