RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 IGFL3Q6UXB1 125 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 DNAJC14Q6Y2X3 702 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-224ENST00000568877 ASB18Q6ZVZ8 466 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 HPS6Q86YV9 775 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 TAGAPQ8N103 731 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 TMEM156Q8N614 296 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 SLC15A4Q8N697 577 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 CDRT4Q8N9R6 151 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 SLC22A8Q8TCC7 542 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 BCAS4Q8TDM0 211 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 HAS2Q92819 552 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 HOXB13Q92826 284 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-224ENST00000568877 HSPBAP1Q96EW2 488 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 C16orf58Q96GQ5 468 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 SLC35A5Q9BS91 424 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 LMF2Q9BU23 707 aaKnown RBP15.48■□□□□ 0.07
COMMD4-224ENST00000568877 RNF32Q9H0A6 362 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 RYDENQ9NUL5 291 aaKnown RBP15.48■□□□□ 0.07
COMMD4-224ENST00000568877 GPATCH2Q9NW75 528 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 PLA2G3Q9NZ20 509 aa15.48■□□□□ 0.07
COMMD4-224ENST00000568877 LEF1Q9UJU2 399 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-224ENST00000568877 A0A096LPI6 279 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 TTC36A6NLP5 189 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 NDUFAB1O14561 156 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ACOX3O15254 700 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 DCTN3O75935 186 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 PTPN6P29350 595 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 CHI3L1P36222 383 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 MAP3K8P41279 467 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 NRG3P56975 720 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ARG2P78540 354 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 TUBA3CQ13748 450 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 LASP1Q14847 261 aaKnown RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 LACTB2Q53H82 288 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ZNF468Q5VIY5 522 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 TUBA3EQ6PEY2 450 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 OPN5Q6U736 354 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 NPSR1Q6W5P4 371 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 WDR53Q7Z5U6 358 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 SLC44A2Q8IWA5 706 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ZADH2Q8N4Q0 377 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ASB15Q8WXK1 588 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 UBL7Q96S82 380 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 UTP23Q9BRU9 249 aaKnown RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 YIPF4Q9BSR8 244 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ACTRT3Q9BYD9 372 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 PAIP1Q9H074 479 aaKnown RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 ZNF71Q9NQZ8 489 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 SLC6A13Q9NSD5 602 aa15.47■□□□□ 0.07
COMMD4-224ENST00000568877 FAF1Q9UNN5 650 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-224ENST00000568877 LOC100653049A0A140TA62 436 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 OR5H15A6NDH6 313 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 TO15178 435 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 KRT34O76011 436 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 OR6B1O95007 311 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 KCNH1O95259 989 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 F10P00742 488 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 KRT16P08779 473 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 ALOX5P09917 674 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 ACP2P11117 423 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 CD96P40200 585 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 CASRP41180 1078 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SOX3P41225 446 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 CYB561P49447 251 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 HLCSP50747 726 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 PSPHP78330 225 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 OC90Q02509 493 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-224ENST00000568877 CYLC2Q14093 348 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-224ENST00000568877 EXOSC6Q5RKV6 272 aaKnown RBP15.46■□□□□ 0.07
COMMD4-224ENST00000568877 LRIF1Q5T3J3 769 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SAXO2Q658L1 398 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 CDC73Q6P1J9 531 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 RETREG3Q86VR2 466 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SNX32Q86XE0 403 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 GPALPP1Q8IXQ4 340 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 DPP10Q8N608 796 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SLC16A11Q8NCK7 471 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 DNAJB8Q8NHS0 232 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SLC9A6Q92581 669 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 NEURL3Q96EH8 262 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SLC35G5Q96KT7 338 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 LRRC37BQ96QE4 947 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 SLC25A18Q9H1K4 315 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 TRIM45Q9H8W5 580 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-224ENST00000568877 ANKRD10Q9NXR5 420 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 PCDHB14Q9Y5E9 798 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 NPFFR2Q9Y5X5 522 aa15.46■□□□□ 0.07
COMMD4-224ENST00000568877 ATMQ13315 3056 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 DOCK10Q96BY6 2186 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 BBIP1A8MTZ0 92 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 A8MVJ9 347 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 FBP2O00757 339 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 DPM1O60762 260 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 NKX2-2O95096 273 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 FBXO45P0C2W1 286 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 HOXB9P17482 250 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-224ENST00000568877 MATN1P21941 496 aa15.45■□□□□ 0.06
COMMD4-224ENST00000568877 ABCD3P28288 659 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms