RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-213	ENST00000566221	CAPRIN1	Q14444	709 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	LASP1	Q14847	261 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	MYBPC3	Q14896	1274 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	HLA-DQA1	Q5Y7H0	255 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ZCCHC12	Q6PEW1	402 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	INO80C	Q6PI98	192 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	C16orf89	Q6UX73	402 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	C6orf120	Q7Z4R8	191 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ARPIN	Q7Z6K5	226 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ARHGAP24	Q8N264	748 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	KIF2B	Q8N4N8	673 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	CDRT4	Q8N9R6	151 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	NUBPL	Q8TB37	319 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	AURKB	Q96GD4	344 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	VSTM2L	Q96N03	204 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ANKRD27	Q96NW4	1050 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	GAL3ST4	Q96RP7	486 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ITPA	Q9BY32	194 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	ACTRT3	Q9BYD9	372 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	DEFB126	Q9BYW3	111 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	WWTR1	Q9GZV5	400 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	GPATCH2	Q9NW75	528 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	TAS2R1	Q9NYW7	299 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	FAF1	Q9UNN5	650 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	DTX4	Q9Y2E6	619 aa		13.73	□□□□□ -0.21
SPG7-213	ENST00000566221	C2orf92	A0A1B0GVN3	265 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	EVPLL	A8MZ36	301 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	CELA2A	P08217	269 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	ITPKB	P27987	946 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	DCAF7	P61962	342 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	PSPH	P78330	225 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	FADD	Q13158	208 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	DEFB109B	Q30KR1	87 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	RUNDC3A	Q59EK9	446 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	IRAK1BP1	Q5VVH5	260 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	CDC73	Q6P1J9	531 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	GPR155	Q7Z3F1	870 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	RNF130	Q86XS8	419 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	SLC5A8	Q8N695	610 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	C17orf47	Q8NEP4	570 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	OR8J3	Q8NGG0	315 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	OR52N2	Q8NGI0	321 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	OR5L2	Q8NGL0	311 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	PNPT1	Q8TCS8	783 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	MIPOL1	Q8TD10	442 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	JADE3	Q92613	823 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	HOXB13	Q92826	284 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	BTBD9	Q96Q07	612 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	SH3GL1	Q99961	368 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	HOPX	Q9BPY8	73 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	SLC39A3	Q9BRY0	314 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	LMF2	Q9BU23	707 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	LHPP	Q9H008	270 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	ING2	Q9H160	280 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	CPNE5	Q9HCH3	593 aa		13.72	□□□□□ -0.21
SPG7-213	ENST00000566221	MASP2	O00187	686 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	SOX30	O94993	753 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	ALOX5	P09917	674 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	ACP2	P11117	423 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	MATN1	P21941	496 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	ITGA3	P26006	1051 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	PPIC	P45877	212 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	SOX8	P57073	446 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	RPS26	P62854	115 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	SPATS1	Q496A3	300 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	EXOSC6	Q5RKV6	272 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	NANOGP8	Q6NSW7	305 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	APLF	Q8IW19	511 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	LGI4	Q8N135	537 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	ZNF441	Q8N8Z8	693 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	RBM15B	Q8NDT2	890 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	FBXO30	Q8TB52	745 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	ADIPOR1	Q96A54	375 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	THOC3	Q96J01	351 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	STAC	Q99469	402 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	GPATCH1	Q9BRR8	931 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	SERHL2	Q9H4I8	314 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	NANOG	Q9H9S0	305 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	DUSP22	Q9NRW4	184 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	RYDEN	Q9NUL5	291 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	GIN1	Q9NXP7	522 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	PRPF19	Q9UMS4	504 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	CNTRL	Q7Z7A1	2325 aa		13.71	□□□□□ -0.21
SPG7-213	ENST00000566221	FRG2C	A6NGY1	282 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	DUXA	A6NLW8	204 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	ACOX3	O15254	700 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	ASNA1	O43681	348 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	PRKN	O60260	465 aa	Predicted RBP	13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	AGR2	O95994	175 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	SLC6A2	P23975	617 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	CPOX	P36551	454 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	MAP3K8	P41279	467 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	CRAT	P43155	626 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	MAN2A2	P49641	1150 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	MVD	P53602	400 aa		13.7	□□□□□ -0.22
SPG7-213	ENST00000566221	MTPN	P58546	118 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms