RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SCMH1Q96GD3 660 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 MARK4Q96L34 752 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 OR52E6Q96RD3 313 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 EPN3Q9H201 632 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 CCDC134Q9H6E4 229 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 NEUROD4Q9HD90 331 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 SACM1LQ9NTJ5 587 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 ZCCHC3Q9NUD5 404 aaKnown RBP14.75□□□□□ -0.05
RAB40C-208ENST00000564703 FGFR1OP2Q9NVK5 253 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 ZIM2Q9NZV7 527 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 MRTO4Q9UKD2 239 aaKnown RBP14.75□□□□□ -0.05
RAB40C-208ENST00000564703 DTX4Q9Y2E6 619 aa14.75□□□□□ -0.05
RAB40C-208ENST00000564703 NME2P1O60361 137 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 NADKO95544 446 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-208ENST00000564703 CPSF4O95639 269 aaKnown RBP14.74□□□□□ -0.05
RAB40C-208ENST00000564703 CNR1P21554 472 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 NME2P22392 152 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 PRIM2P49643 509 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 TLE1Q04724 770 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 NNATQ16517 81 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 SPANXN4Q5MJ08 99 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 ZCCHC12Q6PEW1 402 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 TMEM64Q6YI46 380 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 NUP54Q7Z3B4 507 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 MDGA2Q7Z553 956 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 BCORP1Q8N888 145 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 CDRT4Q8N9R6 151 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 PSD4Q8NDX1 1056 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 OR4A15Q8NGL6 344 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 CHMP6Q96FZ7 201 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 VSTM2LQ96N03 204 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 BTBD9Q96Q07 612 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 RABEP2Q9H5N1 569 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 Q9N2J8 555 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 EQTNQ9NQ60 294 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 SDR39U1Q9NRG7 319 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-208ENST00000564703 FAM120CQ9NX05 1096 aaKnown RBP14.74□□□□□ -0.05
RAB40C-208ENST00000564703 CNIH4Q9P003 139 aa14.74□□□□□ -0.05
RAB40C-208ENST00000564703 FAF1Q9UNN5 650 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-208ENST00000564703 TO15178 435 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 PEX1O43933 1283 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 ZNF354AO60765 605 aaPredicted RBP14.73□□□□□ -0.05
RAB40C-208ENST00000564703 SOX30O94993 753 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 PGRP06401 933 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 ABCD3P28288 659 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 GABRA3P34903 492 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 SOAT1P35610 550 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 POLR2JP52435 117 aaKnown RBP14.73□□□□□ -0.05
RAB40C-208ENST00000564703 DGKQP52824 942 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 MRPS22P82650 360 aaKnown RBP14.73□□□□□ -0.05
RAB40C-208ENST00000564703 PLCXD2Q0VAA5 305 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 TP53BP2Q13625 1128 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 CYP27C1Q4G0S4 372 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 METTL21CQ5VZV1 264 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.73□□□□□ -0.05
RAB40C-208ENST00000564703 ZNF227Q86WZ6 799 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 SULF2Q8IWU5 870 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 PRR22Q8IZ63 422 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 SLC34A3Q8N130 599 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 OR56A1Q8NGH5 318 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 RFWD2Q8NHY2 731 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 GPR151Q8TDV0 419 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 GRHL3Q8TE85 626 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 STON2Q8WXE9 905 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 SLC9A6Q92581 669 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 OMA1Q96E52 524 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 TEX37Q96LM6 180 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 MS4A4EQ96PG1 132 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 HES7Q9BYE0 225 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 RMND5AQ9H871 391 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 ASF1BQ9NVP2 202 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 NTMQ9P121 344 aa14.73□□□□□ -0.05
RAB40C-208ENST00000564703 ABCB7O75027 752 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 NME6O75414 186 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PPM1BO75688 479 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 KRT16P08779 473 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 ALOX5P09917 674 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CT45A8P0DMV1 189 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CT45A9P0DMV2 189 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 IL12AP29459 219 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 IL12BP29460 328 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 ARFIP2P53365 341 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PSMD4P55036 377 aaKnown RBP14.72□□□□□ -0.05
RAB40C-208ENST00000564703 WNT3P56703 355 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CORO7P57737 925 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 HBA1P69905 142 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 NTRK2Q16620 822 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 DECR1Q16698 335 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CT45A2Q5DJT8 189 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PAOXQ6QHF9 649 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 ANKRD46Q86W74 232 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 ATCAYQ86WG3 371 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CLECL1Q8IZS7 167 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 TRIML2Q8N7C3 387 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 POGLUT1Q8NBL1 392 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PSMA8Q8TAA3 256 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 FAR1Q8WVX9 515 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 JADE3Q92613 823 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 DIO2Q92813 273 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms